Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SRFBP1Q8NEF9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 HMGA1P7-201ENST00000406908 502 ntBASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SRFBP1Q8NEF9 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.14
SRFBP1Q8NEF9 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 MED15P5-201ENST00000423150 992 ntBASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 KRT18P3-201ENST00000451602 1288 ntBASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 AC020765.3-201ENST00000613051 740 ntBASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRFBP1Q8NEF9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms