Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 MCCD1P2-201ENST00000423228 335 ntBASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 PGAM5P1-201ENST00000518923 814 ntBASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 MIR3687-2-201ENST00000577708 61 ntBASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 AL009183.1-201ENST00000603760 355 ntBASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 MIR3687-1-201ENST00000614492 61 ntBASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 AC106886.4-201ENST00000623557 2502 ntBASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
RAB42Q8N4Z0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 AC020765.3-201ENST00000613051 740 ntBASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 AC092865.6-201ENST00000642101 219 ntBASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
RAB42Q8N4Z0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 BX842568.4-201ENST00000421222 227 ntBASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms