Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
COL27A1Q8IZC6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 HLA-A-202ENST00000376806 1854 ntBASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 AC092658.1-201ENST00000505836 891 ntBASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 AC092552.1-201ENST00000547243 906 ntBASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
COL27A1Q8IZC6 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 AL645608.8-201ENST00000606034 2086 ntBASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 REXO1L6P-201ENST00000603433 1515 ntBASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 GNRHR2-203ENST00000581100 1187 ntBASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 AC139713.2-201ENST00000641328 2723 ntBASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.36■□□□□ 0.05
COL27A1Q8IZC6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 MIR4525-201ENST00000580000 75 ntBASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
COL27A1Q8IZC6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms