Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 IL9RP2-201ENST00000423948 1312 ntBASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 IGLL3P-201ENST00000412472 434 ntBASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 AC026396.1-201ENST00000419388 421 ntBASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 MIR4515-201ENST00000584082 81 ntBASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCDC116Q8IYX3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC116Q8IYX3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC116Q8IYX3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC116Q8IYX3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC116Q8IYX3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC116Q8IYX3 AL031731.1-201ENST00000642131 2094 ntBASIC15.71■□□□□ 0.1
CCDC116Q8IYX3 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC116Q8IYX3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 FER1L4-210ENST00000615531 5998 ntBASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AL590627.1-203ENST00000421194 1026 ntBASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 HCG4B-203ENST00000450128 991 ntBASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AC145285.3-201ENST00000564603 959 ntBASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC116Q8IYX3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 AC006449.5-201ENST00000610658 2098 ntBASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCDC116Q8IYX3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms