Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 AC027369.6-201ENST00000525520 931 ntBASIC17.64■□□□□ 0.41
RNF135Q8IUD6 ALG1L8P-201ENST00000533887 760 ntBASIC17.64■□□□□ 0.41
RNF135Q8IUD6 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 AL590560.3-201ENST00000623350 461 ntBASIC17.64■□□□□ 0.41
RNF135Q8IUD6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 AL135999.2-201ENST00000622438 1686 ntBASIC17.64■□□□□ 0.41
RNF135Q8IUD6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF135Q8IUD6 AC100757.3-201ENST00000622361 1406 ntBASIC17.64■□□□□ 0.41
RNF135Q8IUD6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 AL023806.1-201ENST00000603994 1649 ntBASIC17.63■□□□□ 0.41
RNF135Q8IUD6 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 SPTLC1P1-201ENST00000447199 261 ntBASIC17.63■□□□□ 0.41
RNF135Q8IUD6 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 AC010336.2-201ENST00000564226 506 ntBASIC17.63■□□□□ 0.41
RNF135Q8IUD6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 CROCCP2-202ENST00000412962 2773 ntBASIC17.63■□□□□ 0.41
RNF135Q8IUD6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF135Q8IUD6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 PCDHA12-202ENST00000613593 2588 ntBASIC17.62■□□□□ 0.41
RNF135Q8IUD6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 MIR4453-201ENST00000584019 89 ntBASIC17.62■□□□□ 0.41
RNF135Q8IUD6 MIR4515-201ENST00000584082 81 ntBASIC17.62■□□□□ 0.41
RNF135Q8IUD6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 AC084346.2-201ENST00000607097 949 ntBASIC17.62■□□□□ 0.41
RNF135Q8IUD6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF135Q8IUD6 AC022144.1-201ENST00000602255 1580 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms