Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 AL365203.3-201ENST00000609742 2057 ntBASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.55■□□□□ 0.88
CHD1LQ86WJ1 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 IGLL3P-201ENST00000412472 434 ntBASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CHD1LQ86WJ1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 VN2R19P-201ENST00000442399 1052 ntBASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 IGHV3-22-201ENST00000520721 359 ntBASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 SLC25A6P4-201ENST00000586535 553 ntBASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 AC020765.3-201ENST00000613051 740 ntBASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 AC008894.3-201ENST00000624324 3103 ntBASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.53■□□□□ 0.88
CHD1LQ86WJ1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 AC046158.3-201ENST00000624947 2558 ntBASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 RNU1-129P-201ENST00000384064 167 ntBASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 U1.21-201ENST00000580816 167 ntBASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 AC024909.3-201ENST00000611513 2257 ntBASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CHD1LQ86WJ1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CHD1LQ86WJ1 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms