Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.65■□□□□ 0.9
UBE3BQ7Z3V4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
UBE3BQ7Z3V4 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.64■□□□□ 0.9
UBE3BQ7Z3V4 OR6D1P-202ENST00000641007 5290 ntBASIC20.64■□□□□ 0.9
UBE3BQ7Z3V4 AC022211.2-201ENST00000585075 2527 ntBASIC20.64■□□□□ 0.9
UBE3BQ7Z3V4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.64■□□□□ 0.9
UBE3BQ7Z3V4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 MIR3197-201ENST00000582241 73 ntBASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 AC092364.2-202ENST00000597012 1073 ntBASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 AL390754.1-201ENST00000619088 582 ntBASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBE3BQ7Z3V4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 AC092580.3-201ENST00000430932 139 ntBASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 AC069120.2-201ENST00000524091 540 ntBASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBE3BQ7Z3V4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 FAM220BP-201ENST00000377689 816 ntBASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 AC093724.1-201ENST00000448659 1027 ntBASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 HLA-J-202ENST00000469281 1241 ntBASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 AC098859.1-201ENST00000502915 1238 ntBASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 AC097493.3-201ENST00000509725 367 ntBASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 IGHV3-42-201ENST00000520410 361 ntBASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 AC020765.3-201ENST00000613051 740 ntBASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
UBE3BQ7Z3V4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms