Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 YBX2P1-201ENST00000394192 760 ntBASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 MIR1233-2-201ENST00000408138 82 ntBASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 MIR1233-1-201ENST00000408722 82 ntBASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 AC140658.5-201ENST00000438532 169 ntBASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 DNAJB3-201ENST00000446806 729 ntBASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.73■□□□□ 0.27
LYSMD3Q7Z3D4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 HLA-J-202ENST00000469281 1241 ntBASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 AP002472.1-201ENST00000577490 586 ntBASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 MTDHP5-201ENST00000598980 586 ntBASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LYSMD3Q7Z3D4 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 MCCD1P2-201ENST00000423228 335 ntBASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 MIR3687-2-201ENST00000577708 61 ntBASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 AL009183.1-201ENST00000603760 355 ntBASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 MIR3687-1-201ENST00000614492 61 ntBASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
LYSMD3Q7Z3D4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms