Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 AC092171.3-201ENST00000610122 2651 ntBASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HIST3H2AQ7L7L0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 PAWRP1-201ENST00000451083 565 ntBASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 OR7E14P-202ENST00000530490 1290 ntBASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 GGTLC5P-201ENST00000617623 998 ntBASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 AC006277.1-201ENST00000624348 1610 ntBASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 AC006538.1-201ENST00000567905 1585 ntBASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HIST3H2AQ7L7L0 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 AKR1C7P-201ENST00000305623 895 ntBASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 MIR1199-201ENST00000621445 119 ntBASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 AC012313.10-201ENST00000623509 926 ntBASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.22■□□□□ 0.03
HIST3H2AQ7L7L0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms