Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 PCDHA1-201ENST00000378133 2726 ntBASIC17.71■□□□□ 0.43
VSTM1Q6UX27 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VSTM1Q6UX27 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VSTM1Q6UX27 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.71■□□□□ 0.42
VSTM1Q6UX27 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
VSTM1Q6UX27 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
VSTM1Q6UX27 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.42
VSTM1Q6UX27 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 AC004461.1-201ENST00000412461 403 ntBASIC17.7■□□□□ 0.42
VSTM1Q6UX27 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.7■□□□□ 0.42
VSTM1Q6UX27 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 AC026691.1-201ENST00000602502 2017 ntBASIC17.7■□□□□ 0.42
VSTM1Q6UX27 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VSTM1Q6UX27 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 TFAMP1-201ENST00000412727 736 ntBASIC17.69■□□□□ 0.42
VSTM1Q6UX27 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 SPDYE11-202ENST00000450699 704 ntBASIC17.69■□□□□ 0.42
VSTM1Q6UX27 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 SPDYE9P-201ENST00000570642 692 ntBASIC17.69■□□□□ 0.42
VSTM1Q6UX27 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 SPDYE10P-202ENST00000612005 668 ntBASIC17.69■□□□□ 0.42
VSTM1Q6UX27 SPDYE8P-202ENST00000612377 668 ntBASIC17.69■□□□□ 0.42
VSTM1Q6UX27 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 AC092171.3-201ENST00000610122 2651 ntBASIC17.69■□□□□ 0.42
VSTM1Q6UX27 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
VSTM1Q6UX27 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.69■□□□□ 0.42
VSTM1Q6UX27 AC092068.3-201ENST00000587894 2016 ntBASIC17.69■□□□□ 0.42
VSTM1Q6UX27 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.68■□□□□ 0.42
VSTM1Q6UX27 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VSTM1Q6UX27 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
VSTM1Q6UX27 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VSTM1Q6UX27 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VSTM1Q6UX27 AC078925.2-201ENST00000624013 1973 ntBASIC17.68■□□□□ 0.42
VSTM1Q6UX27 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms