Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 LINC00167-201ENST00000530583 1419 ntBASIC14.59□□□□□ -0.07
C11orf88Q6PI97 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 NUS1P1-201ENST00000446295 882 ntBASIC14.59□□□□□ -0.07
C11orf88Q6PI97 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 AC090616.6-201ENST00000582640 721 ntBASIC14.59□□□□□ -0.07
C11orf88Q6PI97 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
C11orf88Q6PI97 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
C11orf88Q6PI97 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
C11orf88Q6PI97 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
C11orf88Q6PI97 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.58□□□□□ -0.07
C11orf88Q6PI97 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
C11orf88Q6PI97 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
C11orf88Q6PI97 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
C11orf88Q6PI97 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
C11orf88Q6PI97 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 TSPY22P-201ENST00000427496 604 ntBASIC14.58□□□□□ -0.08
C11orf88Q6PI97 KRT18P65-201ENST00000439811 1286 ntBASIC14.58□□□□□ -0.08
C11orf88Q6PI97 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 LINC01711-201ENST00000598340 967 ntBASIC14.58□□□□□ -0.08
C11orf88Q6PI97 AC092119.3-201ENST00000612618 583 ntBASIC14.58□□□□□ -0.08
C11orf88Q6PI97 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 AC016734.2-201ENST00000624325 1377 ntBASIC14.58□□□□□ -0.08
C11orf88Q6PI97 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
C11orf88Q6PI97 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms