Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 AL513477.1-201ENST00000602865 2407 ntBASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.36■□□□□ 0.37
RFWD3Q6PCD5 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 HCG4-201ENST00000418983 998 ntBASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 AC112191.1-201ENST00000523689 701 ntBASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 AC087641.1-201ENST00000557561 1021 ntBASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 TUBB8P12-201ENST00000308911 1335 ntBASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 TUBB7P-202ENST00000428444 1305 ntBASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 TUBB8P7-204ENST00000567960 1332 ntBASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFWD3Q6PCD5 AC103702.1-201ENST00000548801 2630 ntBASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 MIR4492-201ENST00000581627 80 ntBASIC17.34■□□□□ 0.37
RFWD3Q6PCD5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms