Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDKAL1Q5VV42 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKAL1Q5VV42 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CDKAL1Q5VV42 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKAL1Q5VV42 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CDKAL1Q5VV42 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDKAL1Q5VV42 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 AL592424.1-201ENST00000563624 1536 ntBASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 RPS2P1-201ENST00000434010 821 ntBASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 OR7E47P-204ENST00000575924 449 ntBASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.18■□□□□ 0.5
CDKAL1Q5VV42 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 PRELID1P1-202ENST00000567272 903 ntBASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDKAL1Q5VV42 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 MIR648-201ENST00000385046 94 ntBASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 OR7E14P-202ENST00000530490 1290 ntBASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 PGM5P2-202ENST00000637225 1043 ntBASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 AC126177.1-201ENST00000547829 2218 ntBASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDKAL1Q5VV42 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms