Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SNAPC4Q5SXM2 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 MSTO2P-201ENST00000314835 1709 ntBASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 RPL13P2-201ENST00000440687 659 ntBASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 AL118558.3-201ENST00000607414 1079 ntBASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 AL365330.1-201ENST00000607459 531 ntBASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
SNAPC4Q5SXM2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SNAPC4Q5SXM2 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SNAPC4Q5SXM2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
SNAPC4Q5SXM2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC26.64■■□□□ 1.85
SNAPC4Q5SXM2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC26.64■■□□□ 1.85
SNAPC4Q5SXM2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SNAPC4Q5SXM2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
SNAPC4Q5SXM2 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 FXNP2-201ENST00000411625 547 ntBASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC26.63■■□□□ 1.85
SNAPC4Q5SXM2 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 FO393414.2-201ENST00000405153 598 ntBASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC26.62■■□□□ 1.85
SNAPC4Q5SXM2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SNAPC4Q5SXM2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms