Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC27Q2M243 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC27Q2M243 PCDHB19P-201ENST00000570871 2371 ntBASIC21.56■■□□□ 1.04
CCDC27Q2M243 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 CYP2T1P-202ENST00000641596 2535 ntBASIC21.56■■□□□ 1.04
CCDC27Q2M243 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 STOM-202ENST00000347359 870 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 SPCS2P4-201ENST00000436160 681 ntBASIC21.56■■□□□ 1.04
CCDC27Q2M243 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 GATB-205ENST00000508611 605 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 PRYP6-201ENST00000514804 343 ntBASIC21.56■■□□□ 1.04
CCDC27Q2M243 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 MIR4469-201ENST00000583919 79 ntBASIC21.56■■□□□ 1.04
CCDC27Q2M243 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 AL513210.1-201ENST00000629608 234 ntBASIC21.56■■□□□ 1.04
CCDC27Q2M243 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC27Q2M243 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC27Q2M243 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 AC079140.1-201ENST00000508039 487 ntBASIC21.55■■□□□ 1.04
CCDC27Q2M243 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC27Q2M243 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC27Q2M243 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC27Q2M243 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC27Q2M243 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC27Q2M243 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 AC142381.1-201ENST00000426099 345 ntBASIC21.54■■□□□ 1.04
CCDC27Q2M243 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC27Q2M243 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC27Q2M243 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCDC27Q2M243 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
CCDC27Q2M243 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms