Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RFX7Q2KHR2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFX7Q2KHR2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX7Q2KHR2 RBPMS2P1-201ENST00000437762 623 ntBASIC20■□□□□ 0.79
RFX7Q2KHR2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20■□□□□ 0.79
RFX7Q2KHR2 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20■□□□□ 0.79
RFX7Q2KHR2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20■□□□□ 0.79
RFX7Q2KHR2 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20■□□□□ 0.79
RFX7Q2KHR2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
RFX7Q2KHR2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
RFX7Q2KHR2 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX7Q2KHR2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC20■□□□□ 0.79
RFX7Q2KHR2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
RFX7Q2KHR2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20■□□□□ 0.79
RFX7Q2KHR2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RFX7Q2KHR2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
RFX7Q2KHR2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RFX7Q2KHR2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RFX7Q2KHR2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RFX7Q2KHR2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.99■□□□□ 0.79
RFX7Q2KHR2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 SLC25A39P2-201ENST00000537614 270 ntBASIC19.99■□□□□ 0.79
RFX7Q2KHR2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 AC092364.2-202ENST00000597012 1073 ntBASIC19.99■□□□□ 0.79
RFX7Q2KHR2 AC008267.7-201ENST00000624570 1194 ntBASIC19.99■□□□□ 0.79
RFX7Q2KHR2 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RFX7Q2KHR2 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 MIR346-201ENST00000362234 95 ntBASIC19.98■□□□□ 0.79
RFX7Q2KHR2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 AC142381.1-201ENST00000426099 345 ntBASIC19.98■□□□□ 0.79
RFX7Q2KHR2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 KLF2P3-201ENST00000451977 1087 ntBASIC19.98■□□□□ 0.79
RFX7Q2KHR2 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RFX7Q2KHR2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 KRT18P34-201ENST00000488218 1270 ntBASIC19.97■□□□□ 0.79
RFX7Q2KHR2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms