Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SSRP1Q08945 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.29■□□□□ 0.68
SSRP1Q08945 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.29■□□□□ 0.68
SSRP1Q08945 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.29■□□□□ 0.68
SSRP1Q08945 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.29■□□□□ 0.68
SSRP1Q08945 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSRP1Q08945 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SSRP1Q08945 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.29■□□□□ 0.68
SSRP1Q08945 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSRP1Q08945 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSRP1Q08945 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SSRP1Q08945 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSRP1Q08945 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.29■□□□□ 0.68
SSRP1Q08945 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.29■□□□□ 0.68
SSRP1Q08945 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSRP1Q08945 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.29■□□□□ 0.68
SSRP1Q08945 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SSRP1Q08945 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.29■□□□□ 0.68
SSRP1Q08945 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSRP1Q08945 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SSRP1Q08945 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SSRP1Q08945 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.29■□□□□ 0.68
SSRP1Q08945 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSRP1Q08945 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SSRP1Q08945 PCGF3-213ENST00000620529 1899 ntBASIC19.28■□□□□ 0.68
SSRP1Q08945 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SSRP1Q08945 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.28■□□□□ 0.68
SSRP1Q08945 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.28■□□□□ 0.68
SSRP1Q08945 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 MIR940-201ENST00000401276 94 ntBASIC19.28■□□□□ 0.68
SSRP1Q08945 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
SSRP1Q08945 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.28■□□□□ 0.68
SSRP1Q08945 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.28■□□□□ 0.68
SSRP1Q08945 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.28■□□□□ 0.68
SSRP1Q08945 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.28■□□□□ 0.68
SSRP1Q08945 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.28■□□□□ 0.68
SSRP1Q08945 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.28■□□□□ 0.68
SSRP1Q08945 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SSRP1Q08945 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SSRP1Q08945 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 AL513190.1-201ENST00000621254 727 ntBASIC19.28■□□□□ 0.68
SSRP1Q08945 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.28■□□□□ 0.68
SSRP1Q08945 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
SSRP1Q08945 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC19.28■□□□□ 0.68
SSRP1Q08945 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.28■□□□□ 0.68
SSRP1Q08945 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SSRP1Q08945 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SSRP1Q08945 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SSRP1Q08945 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SSRP1Q08945 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SSRP1Q08945 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SSRP1Q08945 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SSRP1Q08945 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSRP1Q08945 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SSRP1Q08945 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSRP1Q08945 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.27■□□□□ 0.68
SSRP1Q08945 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSRP1Q08945 AC092364.2-201ENST00000596710 2692 ntBASIC19.27■□□□□ 0.68
SSRP1Q08945 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SSRP1Q08945 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSRP1Q08945 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSRP1Q08945 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSRP1Q08945 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.27■□□□□ 0.68
SSRP1Q08945 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.27■□□□□ 0.68
SSRP1Q08945 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.27■□□□□ 0.68
SSRP1Q08945 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.27■□□□□ 0.68
SSRP1Q08945 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.27■□□□□ 0.68
SSRP1Q08945 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.27■□□□□ 0.68
SSRP1Q08945 AL009183.1-201ENST00000603760 355 ntBASIC19.27■□□□□ 0.68
SSRP1Q08945 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.27■□□□□ 0.68
SSRP1Q08945 AC020765.3-201ENST00000613051 740 ntBASIC19.27■□□□□ 0.68
SSRP1Q08945 AC092865.6-201ENST00000642101 219 ntBASIC19.27■□□□□ 0.68
SSRP1Q08945 AC006449.5-201ENST00000610658 2098 ntBASIC19.27■□□□□ 0.68
SSRP1Q08945 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.27■□□□□ 0.68
SSRP1Q08945 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSRP1Q08945 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SSRP1Q08945 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SSRP1Q08945 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.27■□□□□ 0.67
SSRP1Q08945 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SSRP1Q08945 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.27■□□□□ 0.67
SSRP1Q08945 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SSRP1Q08945 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSRP1Q08945 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSRP1Q08945 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSRP1Q08945 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSRP1Q08945 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms