Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 LINC01568-207ENST00000641790 1380 ntBASIC14.11□□□□□ -0.15
SSBP1Q04837 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.11□□□□□ -0.15
SSBP1Q04837 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SSBP1Q04837 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SSBP1Q04837 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 AL020989.1-201ENST00000422979 469 ntBASIC14.11□□□□□ -0.15
SSBP1Q04837 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.11□□□□□ -0.15
SSBP1Q04837 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.11□□□□□ -0.15
SSBP1Q04837 AC008550.1-201ENST00000511500 884 ntBASIC14.11□□□□□ -0.15
SSBP1Q04837 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.11□□□□□ -0.15
SSBP1Q04837 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.11□□□□□ -0.15
SSBP1Q04837 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.11□□□□□ -0.15
SSBP1Q04837 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.11□□□□□ -0.15
SSBP1Q04837 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.11□□□□□ -0.15
SSBP1Q04837 RNF126P1-202ENST00000569893 925 ntBASIC14.11□□□□□ -0.15
SSBP1Q04837 AC011840.4-201ENST00000578471 627 ntBASIC14.11□□□□□ -0.15
SSBP1Q04837 AL590326.2-201ENST00000625139 305 ntBASIC14.11□□□□□ -0.15
SSBP1Q04837 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.11□□□□□ -0.15
SSBP1Q04837 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SSBP1Q04837 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.11□□□□□ -0.15
SSBP1Q04837 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.11□□□□□ -0.15
SSBP1Q04837 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSBP1Q04837 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SSBP1Q04837 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 LINC02228-204ENST00000642115 2962 ntBASIC14.1□□□□□ -0.15
SSBP1Q04837 AC006486.2-201ENST00000624246 2199 ntBASIC14.1□□□□□ -0.15
SSBP1Q04837 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.1□□□□□ -0.15
SSBP1Q04837 GPAA1P2-202ENST00000606848 1787 ntBASIC14.1□□□□□ -0.15
SSBP1Q04837 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 AC246785.2-201ENST00000432512 513 ntBASIC14.1□□□□□ -0.15
SSBP1Q04837 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.1□□□□□ -0.15
SSBP1Q04837 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 AC011467.2-201ENST00000598425 242 ntBASIC14.1□□□□□ -0.15
SSBP1Q04837 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSBP1Q04837 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SSBP1Q04837 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.1□□□□□ -0.15
SSBP1Q04837 AC020658.6-201ENST00000623564 1870 ntBASIC14.1□□□□□ -0.15
SSBP1Q04837 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms