Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.55□□□□□ -0.08
HIST1H3AP68431 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.55□□□□□ -0.08
HIST1H3AP68431 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
HIST1H3AP68431 PCGF3-213ENST00000620529 1899 ntBASIC14.55□□□□□ -0.08
HIST1H3AP68431 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 POU5F1P6-201ENST00000466990 990 ntBASIC14.54□□□□□ -0.08
HIST1H3AP68431 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 AC096734.2-201ENST00000562054 433 ntBASIC14.54□□□□□ -0.08
HIST1H3AP68431 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 AC026691.1-201ENST00000602502 2017 ntBASIC14.54□□□□□ -0.08
HIST1H3AP68431 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 DOC2GP-204ENST00000639052 2548 ntBASIC14.54□□□□□ -0.08
HIST1H3AP68431 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
HIST1H3AP68431 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HIST1H3AP68431 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 AC005052.1-201ENST00000625181 2492 ntBASIC14.53□□□□□ -0.08
HIST1H3AP68431 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HIST1H3AP68431 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.53□□□□□ -0.08
HIST1H3AP68431 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms