Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 FAM220CP-201ENST00000395253 831 ntBASIC14.45□□□□□ -0.1
UBA52P62987 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.45□□□□□ -0.1
UBA52P62987 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.45□□□□□ -0.1
UBA52P62987 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
UBA52P62987 AC068472.1-201ENST00000474589 881 ntBASIC14.45□□□□□ -0.1
UBA52P62987 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.45□□□□□ -0.1
UBA52P62987 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.45□□□□□ -0.1
UBA52P62987 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.45□□□□□ -0.1
UBA52P62987 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.45□□□□□ -0.1
UBA52P62987 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 AP001269.4-201ENST00000609611 512 ntBASIC14.45□□□□□ -0.1
UBA52P62987 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 AC116407.3-201ENST00000623905 1129 ntBASIC14.45□□□□□ -0.1
UBA52P62987 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.45□□□□□ -0.1
UBA52P62987 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
UBA52P62987 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
UBA52P62987 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 AL662844.4-201ENST00000606367 2838 ntBASIC14.44□□□□□ -0.1
UBA52P62987 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
UBA52P62987 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.44□□□□□ -0.1
UBA52P62987 HNRNPDP1-201ENST00000439535 754 ntBASIC14.44□□□□□ -0.1
UBA52P62987 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.44□□□□□ -0.1
UBA52P62987 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.44□□□□□ -0.1
UBA52P62987 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.44□□□□□ -0.1
UBA52P62987 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.44□□□□□ -0.1
UBA52P62987 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.44□□□□□ -0.1
UBA52P62987 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.44□□□□□ -0.1
UBA52P62987 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.44□□□□□ -0.1
UBA52P62987 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.44□□□□□ -0.1
UBA52P62987 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
UBA52P62987 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.44□□□□□ -0.1
UBA52P62987 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
UBA52P62987 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
UBA52P62987 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
UBA52P62987 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 AC100803.2-201ENST00000562459 1963 ntBASIC14.43□□□□□ -0.1
UBA52P62987 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
UBA52P62987 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.43□□□□□ -0.1
UBA52P62987 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC14.43□□□□□ -0.1
UBA52P62987 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.43□□□□□ -0.1
UBA52P62987 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.43□□□□□ -0.1
UBA52P62987 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBA52P62987 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms