Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC11.82□□□□□ -0.52
RPL39P62891 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
RPL39P62891 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC11.82□□□□□ -0.52
RPL39P62891 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.82□□□□□ -0.52
RPL39P62891 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 LINC02228-204ENST00000642115 2962 ntBASIC11.82□□□□□ -0.52
RPL39P62891 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 AC006449.6-201ENST00000612330 2296 ntBASIC11.82□□□□□ -0.52
RPL39P62891 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.82□□□□□ -0.52
RPL39P62891 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.82□□□□□ -0.52
RPL39P62891 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.82□□□□□ -0.52
RPL39P62891 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RPL39P62891 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.81□□□□□ -0.52
RPL39P62891 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RPL39P62891 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
RPL39P62891 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RPL39P62891 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
RPL39P62891 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
RPL39P62891 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC11.81□□□□□ -0.52
RPL39P62891 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC11.81□□□□□ -0.52
RPL39P62891 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
RPL39P62891 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.81□□□□□ -0.52
RPL39P62891 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 CD320-202ENST00000537716 1119 ntTSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 AC010203.1-204ENST00000548782 407 ntBASIC11.81□□□□□ -0.52
RPL39P62891 AC124864.1-201ENST00000623408 392 ntBASIC11.81□□□□□ -0.52
RPL39P62891 WDR6-223ENST00000627177 207 ntTSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RPL39P62891 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RPL39P62891 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms