Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.71■■□□□ 1.07
RIPK4P57078 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RIPK4P57078 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK4P57078 AP000842.3-202ENST00000569238 1080 ntBASIC21.71■■□□□ 1.07
RIPK4P57078 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK4P57078 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.71■■□□□ 1.07
RIPK4P57078 NKG7-205ENST00000600427 520 ntTSL 3 BASIC21.71■■□□□ 1.07
RIPK4P57078 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
RIPK4P57078 AC084121.4-201ENST00000641598 221 ntBASIC21.71■■□□□ 1.07
RIPK4P57078 AF228730.8-201ENST00000642140 221 ntBASIC21.71■■□□□ 1.07
RIPK4P57078 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
RIPK4P57078 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK4P57078 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.71■■□□□ 1.07
RIPK4P57078 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK4P57078 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK4P57078 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK4P57078 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK4P57078 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RIPK4P57078 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 PRORSD1P-202ENST00000563365 2154 ntBASIC21.7■■□□□ 1.06
RIPK4P57078 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.7■■□□□ 1.06
RIPK4P57078 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.7■■□□□ 1.06
RIPK4P57078 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC21.7■■□□□ 1.06
RIPK4P57078 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RIPK4P57078 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.7■■□□□ 1.06
RIPK4P57078 AC020765.3-201ENST00000613051 740 ntBASIC21.7■■□□□ 1.06
RIPK4P57078 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC21.7■■□□□ 1.06
RIPK4P57078 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.7■■□□□ 1.06
RIPK4P57078 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RIPK4P57078 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RIPK4P57078 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC21.7■■□□□ 1.06
RIPK4P57078 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC21.69■■□□□ 1.06
RIPK4P57078 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RIPK4P57078 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
RIPK4P57078 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
RIPK4P57078 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RIPK4P57078 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RIPK4P57078 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RIPK4P57078 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.69■■□□□ 1.06
RIPK4P57078 GGCT-205ENST00000409436 954 ntTSL 3 BASIC21.69■■□□□ 1.06
RIPK4P57078 GPS2P2-201ENST00000430745 888 ntBASIC21.69■■□□□ 1.06
RIPK4P57078 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.69■■□□□ 1.06
RIPK4P57078 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RIPK4P57078 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.69■■□□□ 1.06
RIPK4P57078 PRYP6-201ENST00000514804 343 ntBASIC21.69■■□□□ 1.06
RIPK4P57078 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 SLC25A39P2-201ENST00000537614 270 ntBASIC21.69■■□□□ 1.06
RIPK4P57078 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC21.69■■□□□ 1.06
RIPK4P57078 AC073389.1-201ENST00000595595 795 ntBASIC21.69■■□□□ 1.06
RIPK4P57078 AC009093.7-201ENST00000623853 1223 ntBASIC21.69■■□□□ 1.06
RIPK4P57078 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.69■■□□□ 1.06
RIPK4P57078 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.69■■□□□ 1.06
RIPK4P57078 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RIPK4P57078 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC21.69■■□□□ 1.06
RIPK4P57078 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC21.69■■□□□ 1.06
RIPK4P57078 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.69■■□□□ 1.06
RIPK4P57078 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.69■■□□□ 1.06
RIPK4P57078 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RIPK4P57078 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RIPK4P57078 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RIPK4P57078 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.68■■□□□ 1.06
RIPK4P57078 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC21.68■■□□□ 1.06
RIPK4P57078 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RIPK4P57078 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RIPK4P57078 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK4P57078 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms