Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN20P56880 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN20P56880 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN20P56880 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN20P56880 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN20P56880 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN20P56880 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CLDN20P56880 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN20P56880 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLDN20P56880 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLDN20P56880 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN20P56880 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLDN20P56880 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
CLDN20P56880 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN20P56880 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CLDN20P56880 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.29■□□□□ 0.04
CLDN20P56880 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN20P56880 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
CLDN20P56880 CXCL1P1-201ENST00000502804 216 ntBASIC15.29■□□□□ 0.04
CLDN20P56880 AC107918.2-201ENST00000530817 355 ntBASIC15.29■□□□□ 0.04
CLDN20P56880 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.29■□□□□ 0.04
CLDN20P56880 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN20P56880 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
CLDN20P56880 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN20P56880 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN20P56880 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN20P56880 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN20P56880 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN20P56880 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN20P56880 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 AC023824.1-201ENST00000562945 2975 ntBASIC15.28■□□□□ 0.04
CLDN20P56880 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN20P56880 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CLDN20P56880 AC129492.6-201ENST00000611383 1305 ntBASIC15.28■□□□□ 0.04
CLDN20P56880 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN20P56880 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN20P56880 FAM185BP-201ENST00000443595 716 ntBASIC15.28■□□□□ 0.04
CLDN20P56880 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN20P56880 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN20P56880 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN20P56880 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN20P56880 AC096734.2-201ENST00000562054 433 ntBASIC15.28■□□□□ 0.04
CLDN20P56880 AC040169.1-201ENST00000565382 521 ntBASIC15.28■□□□□ 0.04
CLDN20P56880 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN20P56880 ACTL9-202ENST00000612068 1252 ntBASIC15.28■□□□□ 0.04
CLDN20P56880 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN20P56880 AC092865.6-201ENST00000642101 219 ntBASIC15.28■□□□□ 0.04
CLDN20P56880 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN20P56880 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN20P56880 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms