Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 AC106886.4-201ENST00000623557 2502 ntBASIC14.87□□□□□ -0.03
GFRA1P56159 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
GFRA1P56159 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.87□□□□□ -0.03
GFRA1P56159 FOXO1B-201ENST00000504678 1527 ntBASIC14.87□□□□□ -0.03
GFRA1P56159 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GFRA1P56159 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
GFRA1P56159 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.86□□□□□ -0.03
GFRA1P56159 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.86□□□□□ -0.03
GFRA1P56159 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
GFRA1P56159 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.86□□□□□ -0.03
GFRA1P56159 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.86□□□□□ -0.03
GFRA1P56159 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.86□□□□□ -0.03
GFRA1P56159 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.86□□□□□ -0.03
GFRA1P56159 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.86□□□□□ -0.03
GFRA1P56159 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.86□□□□□ -0.03
GFRA1P56159 ALG1L8P-201ENST00000533887 760 ntBASIC14.86□□□□□ -0.03
GFRA1P56159 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.86□□□□□ -0.03
GFRA1P56159 AC026150.2-201ENST00000564693 1156 ntBASIC14.86□□□□□ -0.03
GFRA1P56159 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
GFRA1P56159 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.86□□□□□ -0.03
GFRA1P56159 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.86□□□□□ -0.03
GFRA1P56159 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.86□□□□□ -0.03
GFRA1P56159 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.86□□□□□ -0.03
GFRA1P56159 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GFRA1P56159 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.86□□□□□ -0.03
GFRA1P56159 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.86□□□□□ -0.03
GFRA1P56159 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
GFRA1P56159 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.86□□□□□ -0.03
GFRA1P56159 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GFRA1P56159 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
GFRA1P56159 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.85□□□□□ -0.03
GFRA1P56159 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
GFRA1P56159 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
GFRA1P56159 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.85□□□□□ -0.03
GFRA1P56159 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.85□□□□□ -0.03
GFRA1P56159 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.85□□□□□ -0.03
GFRA1P56159 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
GFRA1P56159 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
GFRA1P56159 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.85□□□□□ -0.03
GFRA1P56159 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.85□□□□□ -0.03
GFRA1P56159 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.85□□□□□ -0.03
GFRA1P56159 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.85□□□□□ -0.03
GFRA1P56159 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.85□□□□□ -0.03
GFRA1P56159 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.85□□□□□ -0.03
GFRA1P56159 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.85□□□□□ -0.03
GFRA1P56159 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.85□□□□□ -0.03
GFRA1P56159 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
GFRA1P56159 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.85□□□□□ -0.03
GFRA1P56159 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
GFRA1P56159 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.84□□□□□ -0.03
GFRA1P56159 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
GFRA1P56159 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 GGT3P-204ENST00000453783 1664 ntBASIC14.84□□□□□ -0.03
GFRA1P56159 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
GFRA1P56159 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.84□□□□□ -0.03
GFRA1P56159 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
GFRA1P56159 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.84□□□□□ -0.03
GFRA1P56159 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.84□□□□□ -0.03
GFRA1P56159 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
GFRA1P56159 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms