Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.97■□□□□ 0.31
CDH4P55283 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH4P55283 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDH4P55283 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CDH4P55283 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH4P55283 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH4P55283 AC023141.5-201ENST00000458585 616 ntBASIC16.97■□□□□ 0.31
CDH4P55283 AC092183.1-201ENST00000469884 875 ntBASIC16.97■□□□□ 0.31
CDH4P55283 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH4P55283 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH4P55283 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH4P55283 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH4P55283 AL138918.1-201ENST00000568306 659 ntBASIC16.97■□□□□ 0.31
CDH4P55283 AC073389.1-201ENST00000595595 795 ntBASIC16.97■□□□□ 0.31
CDH4P55283 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.97■□□□□ 0.31
CDH4P55283 AC084121.4-201ENST00000641598 221 ntBASIC16.97■□□□□ 0.31
CDH4P55283 AF228730.8-201ENST00000642140 221 ntBASIC16.97■□□□□ 0.31
CDH4P55283 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CDH4P55283 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CDH4P55283 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 AGGF1P2-201ENST00000426656 2106 ntBASIC16.97■□□□□ 0.31
CDH4P55283 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
CDH4P55283 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH4P55283 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH4P55283 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH4P55283 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH4P55283 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDH4P55283 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH4P55283 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 MIR346-201ENST00000362234 95 ntBASIC16.96■□□□□ 0.31
CDH4P55283 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH4P55283 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH4P55283 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH4P55283 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH4P55283 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDH4P55283 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH4P55283 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH4P55283 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH4P55283 PRYP6-201ENST00000514804 343 ntBASIC16.96■□□□□ 0.31
CDH4P55283 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH4P55283 AC105233.2-201ENST00000523697 349 ntBASIC16.96■□□□□ 0.31
CDH4P55283 AF228730.5-201ENST00000530288 346 ntBASIC16.96■□□□□ 0.31
CDH4P55283 AC093520.2-201ENST00000561830 333 ntBASIC16.96■□□□□ 0.31
CDH4P55283 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH4P55283 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH4P55283 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.96■□□□□ 0.31
CDH4P55283 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH4P55283 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
CDH4P55283 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 FLJ38576-201ENST00000623820 2459 ntBASIC16.96■□□□□ 0.31
CDH4P55283 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
CDH4P55283 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CDH4P55283 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH4P55283 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH4P55283 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH4P55283 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.96■□□□□ 0.3
CDH4P55283 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH4P55283 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CDH4P55283 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH4P55283 UXT-AS1-201ENST00000590504 1525 ntBASIC16.96■□□□□ 0.3
CDH4P55283 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.3
CDH4P55283 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 PRORSD1P-202ENST00000563365 2154 ntBASIC16.95■□□□□ 0.3
CDH4P55283 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH4P55283 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH4P55283 PCGF3-213ENST00000620529 1899 ntBASIC16.95■□□□□ 0.3
CDH4P55283 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH4P55283 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 AC073439.1-201ENST00000624121 1774 ntBASIC16.95■□□□□ 0.3
CDH4P55283 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH4P55283 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CDH4P55283 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH4P55283 UBALD1-205ENST00000590891 2641 ntBASIC16.95■□□□□ 0.3
CDH4P55283 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms