Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGCS2P54868 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HMGCS2P54868 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGCS2P54868 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 AL645728.1-201ENST00000366221 2101 ntBASIC19.05■□□□□ 0.64
HMGCS2P54868 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGCS2P54868 ARSEP1-201ENST00000420443 635 ntBASIC19.05■□□□□ 0.64
HMGCS2P54868 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HMGCS2P54868 DOC2GP-202ENST00000514950 1163 ntBASIC19.05■□□□□ 0.64
HMGCS2P54868 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGCS2P54868 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.05■□□□□ 0.64
HMGCS2P54868 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGCS2P54868 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.05■□□□□ 0.64
HMGCS2P54868 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.05■□□□□ 0.64
HMGCS2P54868 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGCS2P54868 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HMGCS2P54868 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.05■□□□□ 0.64
HMGCS2P54868 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HMGCS2P54868 FZD10-202ENST00000539839 3282 ntBASIC19.05■□□□□ 0.64
HMGCS2P54868 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 AL589702.1-201ENST00000641229 1509 ntBASIC19.05■□□□□ 0.64
HMGCS2P54868 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS2P54868 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGCS2P54868 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCS2P54868 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HMGCS2P54868 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGCS2P54868 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HMGCS2P54868 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 AC098614.1-201ENST00000368528 745 ntBASIC19.04■□□□□ 0.64
HMGCS2P54868 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGCS2P54868 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
HMGCS2P54868 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.04■□□□□ 0.64
HMGCS2P54868 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.04■□□□□ 0.64
HMGCS2P54868 ATP5G2P4-201ENST00000442175 420 ntBASIC19.04■□□□□ 0.64
HMGCS2P54868 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGCS2P54868 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.04■□□□□ 0.64
HMGCS2P54868 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCS2P54868 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCS2P54868 CHCHD2P3-201ENST00000603038 451 ntBASIC19.04■□□□□ 0.64
HMGCS2P54868 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 IGHV3-72-202ENST00000621503 303 ntBASIC19.04■□□□□ 0.64
HMGCS2P54868 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HMGCS2P54868 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
HMGCS2P54868 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGCS2P54868 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HMGCS2P54868 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS2P54868 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
HMGCS2P54868 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.04■□□□□ 0.64
HMGCS2P54868 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS2P54868 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HMGCS2P54868 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGCS2P54868 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS2P54868 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS2P54868 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS2P54868 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
HMGCS2P54868 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HMGCS2P54868 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
HMGCS2P54868 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS2P54868 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS2P54868 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.03■□□□□ 0.64
HMGCS2P54868 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC19.03■□□□□ 0.64
HMGCS2P54868 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGCS2P54868 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.03■□□□□ 0.64
HMGCS2P54868 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.03■□□□□ 0.64
HMGCS2P54868 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGCS2P54868 INE1-201ENST00000456273 945 ntBASIC19.03■□□□□ 0.64
HMGCS2P54868 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HMGCS2P54868 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HMGCS2P54868 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
HMGCS2P54868 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS2P54868 WASH4P-201ENST00000564273 1246 ntBASIC19.03■□□□□ 0.64
HMGCS2P54868 AC061975.2-201ENST00000581722 295 ntBASIC19.03■□□□□ 0.64
HMGCS2P54868 AC024267.1-201ENST00000582320 895 ntBASIC19.03■□□□□ 0.64
HMGCS2P54868 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGCS2P54868 AL139011.1-202ENST00000642063 584 ntBASIC19.03■□□□□ 0.64
HMGCS2P54868 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGCS2P54868 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HMGCS2P54868 AC141586.5-201ENST00000624546 2050 ntBASIC19.03■□□□□ 0.64
HMGCS2P54868 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms