Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE1AP54750 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE1AP54750 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PDE1AP54750 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE1AP54750 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE1AP54750 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE1AP54750 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
PDE1AP54750 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE1AP54750 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE1AP54750 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDE1AP54750 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE1AP54750 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.28■□□□□ 0.84
PDE1AP54750 AC092474.2-201ENST00000424288 719 ntBASIC20.28■□□□□ 0.84
PDE1AP54750 POU5F1P6-201ENST00000466990 990 ntBASIC20.28■□□□□ 0.84
PDE1AP54750 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDE1AP54750 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.28■□□□□ 0.84
PDE1AP54750 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE1AP54750 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.28■□□□□ 0.84
PDE1AP54750 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.28■□□□□ 0.84
PDE1AP54750 FAM197Y3-203ENST00000618346 717 ntBASIC20.28■□□□□ 0.84
PDE1AP54750 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.28■□□□□ 0.84
PDE1AP54750 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE1AP54750 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
PDE1AP54750 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE1AP54750 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.27■□□□□ 0.84
PDE1AP54750 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
PDE1AP54750 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE1AP54750 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PDE1AP54750 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PDE1AP54750 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE1AP54750 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE1AP54750 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE1AP54750 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE1AP54750 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE1AP54750 MED15P5-201ENST00000423150 992 ntBASIC20.27■□□□□ 0.84
PDE1AP54750 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE1AP54750 AL591424.1-201ENST00000442569 1213 ntBASIC20.27■□□□□ 0.84
PDE1AP54750 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.27■□□□□ 0.84
PDE1AP54750 KRT18P3-201ENST00000451602 1288 ntBASIC20.27■□□□□ 0.84
PDE1AP54750 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.27■□□□□ 0.84
PDE1AP54750 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.27■□□□□ 0.84
PDE1AP54750 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.27■□□□□ 0.84
PDE1AP54750 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE1AP54750 PDPK2P-202ENST00000562415 1191 ntBASIC20.27■□□□□ 0.84
PDE1AP54750 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC20.27■□□□□ 0.84
PDE1AP54750 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.27■□□□□ 0.84
PDE1AP54750 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PDE1AP54750 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE1AP54750 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PDE1AP54750 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDE1AP54750 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE1AP54750 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PDE1AP54750 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDE1AP54750 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDE1AP54750 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDE1AP54750 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDE1AP54750 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
PDE1AP54750 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDE1AP54750 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE1AP54750 REXO1L8P-201ENST00000604378 1897 ntBASIC20.26■□□□□ 0.83
PDE1AP54750 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PDE1AP54750 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE1AP54750 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE1AP54750 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE1AP54750 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE1AP54750 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDE1AP54750 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.26■□□□□ 0.83
PDE1AP54750 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDE1AP54750 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.26■□□□□ 0.83
PDE1AP54750 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE1AP54750 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.26■□□□□ 0.83
PDE1AP54750 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE1AP54750 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.26■□□□□ 0.83
PDE1AP54750 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE1AP54750 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE1AP54750 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.26■□□□□ 0.83
PDE1AP54750 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.26■□□□□ 0.83
PDE1AP54750 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE1AP54750 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE1AP54750 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE1AP54750 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE1AP54750 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE1AP54750 PCDHA1-201ENST00000378133 2726 ntBASIC20.26■□□□□ 0.83
PDE1AP54750 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.25■□□□□ 0.83
PDE1AP54750 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE1AP54750 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.25■□□□□ 0.83
PDE1AP54750 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDE1AP54750 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms