Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD23BP54727 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RAD23BP54727 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD23BP54727 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.8■□□□□ 0.44
RAD23BP54727 AC140658.5-201ENST00000438532 169 ntBASIC17.8■□□□□ 0.44
RAD23BP54727 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.8■□□□□ 0.44
RAD23BP54727 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.8■□□□□ 0.44
RAD23BP54727 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
RAD23BP54727 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.8■□□□□ 0.44
RAD23BP54727 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD23BP54727 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.8■□□□□ 0.44
RAD23BP54727 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.8■□□□□ 0.44
RAD23BP54727 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.8■□□□□ 0.44
RAD23BP54727 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RAD23BP54727 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.8■□□□□ 0.44
RAD23BP54727 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD23BP54727 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD23BP54727 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.8■□□□□ 0.44
RAD23BP54727 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD23BP54727 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD23BP54727 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RAD23BP54727 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RAD23BP54727 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD23BP54727 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
RAD23BP54727 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.8■□□□□ 0.44
RAD23BP54727 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD23BP54727 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD23BP54727 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD23BP54727 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD23BP54727 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD23BP54727 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RAD23BP54727 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.79■□□□□ 0.44
RAD23BP54727 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RAD23BP54727 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RAD23BP54727 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD23BP54727 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.79■□□□□ 0.44
RAD23BP54727 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 AL031055.1-201ENST00000606362 631 ntBASIC17.79■□□□□ 0.44
RAD23BP54727 OR6D1P-203ENST00000641209 4860 ntBASIC17.79■□□□□ 0.44
RAD23BP54727 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD23BP54727 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD23BP54727 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RAD23BP54727 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAD23BP54727 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.78■□□□□ 0.44
RAD23BP54727 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.78■□□□□ 0.44
RAD23BP54727 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.78■□□□□ 0.44
RAD23BP54727 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.78■□□□□ 0.44
RAD23BP54727 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.78■□□□□ 0.44
RAD23BP54727 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 AC004832.2-201ENST00000426397 482 ntBASIC17.78■□□□□ 0.44
RAD23BP54727 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.78■□□□□ 0.44
RAD23BP54727 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.78■□□□□ 0.44
RAD23BP54727 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.78■□□□□ 0.44
RAD23BP54727 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.78■□□□□ 0.44
RAD23BP54727 AC002347.1-201ENST00000569543 541 ntBASIC17.78■□□□□ 0.44
RAD23BP54727 AP002472.1-201ENST00000577490 586 ntBASIC17.78■□□□□ 0.44
RAD23BP54727 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.78■□□□□ 0.44
RAD23BP54727 AL009183.1-201ENST00000603760 355 ntBASIC17.78■□□□□ 0.44
RAD23BP54727 AC068137.2-201ENST00000605408 478 ntBASIC17.78■□□□□ 0.44
RAD23BP54727 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RAD23BP54727 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD23BP54727 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms