Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.3■□□□□ 0.52
PMS1P54277 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.3■□□□□ 0.52
PMS1P54277 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.3■□□□□ 0.52
PMS1P54277 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 AC012569.1-201ENST00000591191 1524 ntBASIC18.3■□□□□ 0.52
PMS1P54277 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 AC010491.1-201ENST00000563101 2797 ntBASIC18.3■□□□□ 0.52
PMS1P54277 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.3■□□□□ 0.52
PMS1P54277 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.3■□□□□ 0.52
PMS1P54277 FAAHP1-202ENST00000446499 1238 ntBASIC18.3■□□□□ 0.52
PMS1P54277 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 AC108751.1-201ENST00000490852 363 ntBASIC18.3■□□□□ 0.52
PMS1P54277 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.3■□□□□ 0.52
PMS1P54277 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.3■□□□□ 0.52
PMS1P54277 KRT126P-201ENST00000549467 1181 ntBASIC18.3■□□□□ 0.52
PMS1P54277 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.3■□□□□ 0.52
PMS1P54277 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PMS1P54277 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PMS1P54277 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
PMS1P54277 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PMS1P54277 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
PMS1P54277 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC18.29■□□□□ 0.52
PMS1P54277 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PMS1P54277 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.29■□□□□ 0.52
PMS1P54277 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.29■□□□□ 0.52
PMS1P54277 RPS2P28-201ENST00000314255 741 ntBASIC18.29■□□□□ 0.52
PMS1P54277 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.29■□□□□ 0.52
PMS1P54277 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.29■□□□□ 0.52
PMS1P54277 AC009947.1-201ENST00000444350 727 ntBASIC18.29■□□□□ 0.52
PMS1P54277 AC009078.2-202ENST00000463353 338 ntBASIC18.29■□□□□ 0.52
PMS1P54277 UNC93B6-202ENST00000528242 690 ntBASIC18.29■□□□□ 0.52
PMS1P54277 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 SLC25A6P4-201ENST00000586535 553 ntBASIC18.29■□□□□ 0.52
PMS1P54277 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.29■□□□□ 0.52
PMS1P54277 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.29■□□□□ 0.52
PMS1P54277 AP001350.2-201ENST00000625104 1094 ntBASIC18.29■□□□□ 0.52
PMS1P54277 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.29■□□□□ 0.52
PMS1P54277 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PMS1P54277 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.29■□□□□ 0.52
PMS1P54277 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 AL603832.2-201ENST00000566195 2125 ntBASIC18.29■□□□□ 0.52
PMS1P54277 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.29■□□□□ 0.52
PMS1P54277 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
PMS1P54277 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.29■□□□□ 0.52
PMS1P54277 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
PMS1P54277 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PMS1P54277 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 AC022188.1-201ENST00000620960 1664 ntBASIC18.28■□□□□ 0.52
PMS1P54277 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PMS1P54277 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.28■□□□□ 0.52
PMS1P54277 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.28■□□□□ 0.52
PMS1P54277 AL162727.3-201ENST00000635661 2787 ntBASIC18.28■□□□□ 0.52
PMS1P54277 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.28■□□□□ 0.52
PMS1P54277 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.28■□□□□ 0.52
PMS1P54277 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.28■□□□□ 0.52
PMS1P54277 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.28■□□□□ 0.52
PMS1P54277 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 HMGA1P7-201ENST00000406908 502 ntBASIC18.28■□□□□ 0.52
PMS1P54277 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.28■□□□□ 0.52
PMS1P54277 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.28■□□□□ 0.52
PMS1P54277 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.28■□□□□ 0.52
PMS1P54277 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PMS1P54277 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PMS1P54277 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms