Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC6A12P48065 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC6A12P48065 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SLC6A12P48065 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC6A12P48065 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.03■□□□□ 0.16
SLC6A12P48065 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC6A12P48065 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC6A12P48065 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 AC106730.1-201ENST00000566722 1090 ntBASIC16.03■□□□□ 0.16
SLC6A12P48065 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
SLC6A12P48065 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.03■□□□□ 0.16
SLC6A12P48065 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC6A12P48065 AC120114.3-201ENST00000611923 658 ntBASIC16.03■□□□□ 0.16
SLC6A12P48065 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
SLC6A12P48065 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC6A12P48065 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC6A12P48065 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC6A12P48065 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 AC006449.6-201ENST00000612330 2296 ntBASIC16.03■□□□□ 0.16
SLC6A12P48065 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
SLC6A12P48065 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC6A12P48065 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC6A12P48065 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC6A12P48065 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC6A12P48065 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SLC6A12P48065 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 ZNF259P1-201ENST00000407656 1365 ntBASIC16.02■□□□□ 0.16
SLC6A12P48065 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
SLC6A12P48065 AL596087.1-201ENST00000400979 1969 ntBASIC16.02■□□□□ 0.16
SLC6A12P48065 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC6A12P48065 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC6A12P48065 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SLC6A12P48065 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC6A12P48065 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC6A12P48065 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC6A12P48065 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC6A12P48065 AC092474.2-201ENST00000424288 719 ntBASIC16.02■□□□□ 0.16
SLC6A12P48065 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
SLC6A12P48065 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC6A12P48065 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC6A12P48065 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC6A12P48065 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.02■□□□□ 0.16
SLC6A12P48065 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC6A12P48065 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
SLC6A12P48065 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC6A12P48065 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC6A12P48065 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A12P48065 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC6A12P48065 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A12P48065 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A12P48065 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A12P48065 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A12P48065 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A12P48065 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A12P48065 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC6A12P48065 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
SLC6A12P48065 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A12P48065 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.02■□□□□ 0.15
SLC6A12P48065 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A12P48065 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A12P48065 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 REXO1L8P-201ENST00000604378 1897 ntBASIC16.01■□□□□ 0.15
SLC6A12P48065 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC6A12P48065 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SLC6A12P48065 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC6A12P48065 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC6A12P48065 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A12P48065 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC6A12P48065 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC6A12P48065 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC6A12P48065 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.01■□□□□ 0.15
SLC6A12P48065 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC6A12P48065 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC6A12P48065 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms