Protein–RNA interactions for Protein: P45378

TNNT3, Troponin T, fast skeletal muscle, humanhuman

Predicted RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNT3P45378 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TNNT3P45378 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.08■□□□□ 0.49
TNNT3P45378 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TNNT3P45378 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TNNT3P45378 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.08■□□□□ 0.48
TNNT3P45378 MTCL1P1-201ENST00000446207 792 ntBASIC18.08■□□□□ 0.48
TNNT3P45378 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 KRT8P26-201ENST00000534154 1276 ntBASIC18.08■□□□□ 0.48
TNNT3P45378 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.08■□□□□ 0.48
TNNT3P45378 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.08■□□□□ 0.48
TNNT3P45378 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.08■□□□□ 0.48
TNNT3P45378 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.08■□□□□ 0.48
TNNT3P45378 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.08■□□□□ 0.48
TNNT3P45378 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.08■□□□□ 0.48
TNNT3P45378 AL121672.3-201ENST00000608644 468 ntBASIC18.08■□□□□ 0.48
TNNT3P45378 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.08■□□□□ 0.48
TNNT3P45378 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 AC087386.2-201ENST00000623212 4637 ntBASIC18.08■□□□□ 0.48
TNNT3P45378 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.08■□□□□ 0.48
TNNT3P45378 AC104581.4-201ENST00000623126 3052 ntBASIC18.08■□□□□ 0.48
TNNT3P45378 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC18.08■□□□□ 0.48
TNNT3P45378 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.08■□□□□ 0.48
TNNT3P45378 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TNNT3P45378 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TNNT3P45378 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TNNT3P45378 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
TNNT3P45378 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.07■□□□□ 0.48
TNNT3P45378 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.07■□□□□ 0.48
TNNT3P45378 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.07■□□□□ 0.48
TNNT3P45378 SPDYE13P-201ENST00000445314 798 ntBASIC18.07■□□□□ 0.48
TNNT3P45378 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.07■□□□□ 0.48
TNNT3P45378 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.07■□□□□ 0.48
TNNT3P45378 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.07■□□□□ 0.48
TNNT3P45378 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
TNNT3P45378 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.07■□□□□ 0.48
TNNT3P45378 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TNNT3P45378 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.07■□□□□ 0.48
TNNT3P45378 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.07■□□□□ 0.48
TNNT3P45378 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TNNT3P45378 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TNNT3P45378 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
TNNT3P45378 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
TNNT3P45378 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TNNT3P45378 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.06■□□□□ 0.48
TNNT3P45378 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TNNT3P45378 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.06■□□□□ 0.48
TNNT3P45378 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.06■□□□□ 0.48
TNNT3P45378 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.06■□□□□ 0.48
TNNT3P45378 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TNNT3P45378 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.06■□□□□ 0.48
TNNT3P45378 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TNNT3P45378 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TNNT3P45378 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.06■□□□□ 0.48
TNNT3P45378 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.06■□□□□ 0.48
TNNT3P45378 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TNNT3P45378 AC011840.4-201ENST00000578471 627 ntBASIC18.06■□□□□ 0.48
TNNT3P45378 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
TNNT3P45378 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TNNT3P45378 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TNNT3P45378 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms