Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 AC018712.1-201ENST00000455767 687 ntBASIC17.43■□□□□ 0.38
SLC1A1P43005 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC1A1P43005 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC1A1P43005 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC1A1P43005 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.43■□□□□ 0.38
SLC1A1P43005 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC1A1P43005 TP73-AS1-207ENST00000624167 988 ntBASIC17.43■□□□□ 0.38
SLC1A1P43005 AC005593.1-201ENST00000624894 515 ntBASIC17.43■□□□□ 0.38
SLC1A1P43005 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC1A1P43005 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC1A1P43005 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC1A1P43005 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SLC1A1P43005 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC1A1P43005 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC1A1P43005 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SLC1A1P43005 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.43■□□□□ 0.38
SLC1A1P43005 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.43■□□□□ 0.38
SLC1A1P43005 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC1A1P43005 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
SLC1A1P43005 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC1A1P43005 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
SLC1A1P43005 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 AC007950.2-201ENST00000615045 2347 ntBASIC17.42■□□□□ 0.38
SLC1A1P43005 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC1A1P43005 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC1A1P43005 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
SLC1A1P43005 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 MRPL20P1-201ENST00000400819 433 ntBASIC17.42■□□□□ 0.38
SLC1A1P43005 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC1A1P43005 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SLC1A1P43005 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC1A1P43005 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC1A1P43005 UNC93B7-201ENST00000509439 705 ntBASIC17.42■□□□□ 0.38
SLC1A1P43005 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.42■□□□□ 0.38
SLC1A1P43005 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
SLC1A1P43005 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC1A1P43005 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SLC1A1P43005 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC1A1P43005 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC1A1P43005 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.42■□□□□ 0.38
SLC1A1P43005 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SLC1A1P43005 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC1A1P43005 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.42■□□□□ 0.38
SLC1A1P43005 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SLC1A1P43005 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC1A1P43005 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC1A1P43005 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
SLC1A1P43005 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A1P43005 AL162727.3-201ENST00000635661 2787 ntBASIC17.41■□□□□ 0.38
SLC1A1P43005 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC1A1P43005 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 AL139384.1-201ENST00000612143 3047 ntBASIC17.41■□□□□ 0.38
SLC1A1P43005 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 CICP6-201ENST00000457191 2729 ntBASIC17.41■□□□□ 0.38
SLC1A1P43005 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
SLC1A1P43005 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SLC1A1P43005 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A1P43005 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC1A1P43005 FAM197Y8-203ENST00000450145 560 ntBASIC17.41■□□□□ 0.38
SLC1A1P43005 AF186996.4-201ENST00000467186 377 ntBASIC17.41■□□□□ 0.38
SLC1A1P43005 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC1A1P43005 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SLC1A1P43005 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A1P43005 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.41■□□□□ 0.38
SLC1A1P43005 AL121912.1-201ENST00000603683 238 ntBASIC17.41■□□□□ 0.38
SLC1A1P43005 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A1P43005 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.41■□□□□ 0.38
SLC1A1P43005 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A1P43005 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SLC1A1P43005 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.41■□□□□ 0.38
SLC1A1P43005 AC012569.1-201ENST00000591191 1524 ntBASIC17.41■□□□□ 0.38
SLC1A1P43005 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms