Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CXCL5P42830 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.29□□□□□ -0.6
CXCL5P42830 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.29□□□□□ -0.6
CXCL5P42830 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CXCL5P42830 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CXCL5P42830 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
CXCL5P42830 AMT-206ENST00000458307 1860 ntTSL 2 BASIC11.29□□□□□ -0.6
CXCL5P42830 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CXCL5P42830 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CXCL5P42830 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
CXCL5P42830 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC11.29□□□□□ -0.6
CXCL5P42830 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CXCL5P42830 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.29□□□□□ -0.6
CXCL5P42830 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.29□□□□□ -0.6
CXCL5P42830 AC092171.3-201ENST00000610122 2651 ntBASIC11.29□□□□□ -0.6
CXCL5P42830 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CXCL5P42830 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
CXCL5P42830 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.29□□□□□ -0.6
CXCL5P42830 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CXCL5P42830 AL645728.1-201ENST00000366221 2101 ntBASIC11.29□□□□□ -0.6
CXCL5P42830 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC11.29□□□□□ -0.6
CXCL5P42830 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CXCL5P42830 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CXCL5P42830 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CXCL5P42830 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
CXCL5P42830 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 AC002310.6-201ENST00000624451 1377 ntBASIC11.28□□□□□ -0.6
CXCL5P42830 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 TERF1P1-201ENST00000311003 1181 ntBASIC11.28□□□□□ -0.6
CXCL5P42830 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.28□□□□□ -0.6
CXCL5P42830 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.28□□□□□ -0.6
CXCL5P42830 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
CXCL5P42830 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 AC005336.2-201ENST00000593183 939 ntBASIC11.28□□□□□ -0.6
CXCL5P42830 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 ME2P1-201ENST00000426028 1970 ntBASIC11.28□□□□□ -0.6
CXCL5P42830 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 AC126177.1-201ENST00000547829 2218 ntBASIC11.28□□□□□ -0.6
CXCL5P42830 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
CXCL5P42830 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC11.28□□□□□ -0.6
CXCL5P42830 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CXCL5P42830 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CXCL5P42830 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC11.27□□□□□ -0.6
CXCL5P42830 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CXCL5P42830 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
CXCL5P42830 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CXCL5P42830 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.6
CXCL5P42830 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC11.27□□□□□ -0.6
CXCL5P42830 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC11.27□□□□□ -0.6
CXCL5P42830 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CXCL5P42830 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms