Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6BP35913 NOC2LP1-202ENST00000452600 2235 ntBASIC20.3■□□□□ 0.84
PDE6BP35913 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.3■□□□□ 0.84
PDE6BP35913 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDE6BP35913 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.3■□□□□ 0.84
PDE6BP35913 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.29■□□□□ 0.84
PDE6BP35913 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PDE6BP35913 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PDE6BP35913 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.29■□□□□ 0.84
PDE6BP35913 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PDE6BP35913 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.29■□□□□ 0.84
PDE6BP35913 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE6BP35913 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE6BP35913 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.29■□□□□ 0.84
PDE6BP35913 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PDE6BP35913 BOLA2P3-201ENST00000404566 256 ntBASIC20.29■□□□□ 0.84
PDE6BP35913 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PDE6BP35913 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.29■□□□□ 0.84
PDE6BP35913 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE6BP35913 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.29■□□□□ 0.84
PDE6BP35913 AC015936.2-201ENST00000593177 259 ntBASIC20.29■□□□□ 0.84
PDE6BP35913 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC20.29■□□□□ 0.84
PDE6BP35913 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PDE6BP35913 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.29■□□□□ 0.84
PDE6BP35913 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDE6BP35913 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PDE6BP35913 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDE6BP35913 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE6BP35913 REXO1L6P-201ENST00000603433 1515 ntBASIC20.28■□□□□ 0.84
PDE6BP35913 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDE6BP35913 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PDE6BP35913 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE6BP35913 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE6BP35913 AL139010.1-201ENST00000454878 894 ntBASIC20.28■□□□□ 0.84
PDE6BP35913 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.28■□□□□ 0.84
PDE6BP35913 AC092552.1-201ENST00000547243 906 ntBASIC20.28■□□□□ 0.84
PDE6BP35913 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.28■□□□□ 0.84
PDE6BP35913 MIR4525-201ENST00000580000 75 ntBASIC20.28■□□□□ 0.84
PDE6BP35913 AC008735.3-201ENST00000596646 500 ntBASIC20.28■□□□□ 0.84
PDE6BP35913 AC020765.3-201ENST00000613051 740 ntBASIC20.28■□□□□ 0.84
PDE6BP35913 AL033527.5-201ENST00000641382 801 ntBASIC20.28■□□□□ 0.84
PDE6BP35913 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE6BP35913 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.28■□□□□ 0.84
PDE6BP35913 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PDE6BP35913 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDE6BP35913 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.27■□□□□ 0.84
PDE6BP35913 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.27■□□□□ 0.84
PDE6BP35913 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.27■□□□□ 0.84
PDE6BP35913 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC20.27■□□□□ 0.84
PDE6BP35913 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.27■□□□□ 0.84
PDE6BP35913 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDE6BP35913 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.27■□□□□ 0.84
PDE6BP35913 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PDE6BP35913 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PDE6BP35913 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.27■□□□□ 0.84
PDE6BP35913 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.27■□□□□ 0.84
PDE6BP35913 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.27■□□□□ 0.84
PDE6BP35913 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 SNX29P1-201ENST00000548357 1007 ntBASIC20.27■□□□□ 0.84
PDE6BP35913 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
PDE6BP35913 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.27■□□□□ 0.84
PDE6BP35913 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PDE6BP35913 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PDE6BP35913 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms