Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
SOX11P35716 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
SOX11P35716 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX11P35716 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 RPS2P1-201ENST00000434010 821 ntBASIC16.37■□□□□ 0.21
SOX11P35716 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.37■□□□□ 0.21
SOX11P35716 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX11P35716 NKAPP1-205ENST00000585790 367 ntBASIC16.37■□□□□ 0.21
SOX11P35716 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SOX11P35716 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX11P35716 AC116407.3-201ENST00000623905 1129 ntBASIC16.37■□□□□ 0.21
SOX11P35716 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.37■□□□□ 0.21
SOX11P35716 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.37■□□□□ 0.21
SOX11P35716 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SOX11P35716 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SOX11P35716 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
SOX11P35716 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX11P35716 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.37■□□□□ 0.21
SOX11P35716 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX11P35716 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
SOX11P35716 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
SOX11P35716 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.36■□□□□ 0.21
SOX11P35716 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.36■□□□□ 0.21
SOX11P35716 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.36■□□□□ 0.21
SOX11P35716 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.36■□□□□ 0.21
SOX11P35716 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 SSR1P1-201ENST00000407630 814 ntBASIC16.36■□□□□ 0.21
SOX11P35716 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.36■□□□□ 0.21
SOX11P35716 KRT18P58-201ENST00000527480 1120 ntBASIC16.36■□□□□ 0.21
SOX11P35716 OR7E14P-202ENST00000530490 1290 ntBASIC16.36■□□□□ 0.21
SOX11P35716 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.36■□□□□ 0.21
SOX11P35716 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 AC109462.3-201ENST00000573934 613 ntBASIC16.36■□□□□ 0.21
SOX11P35716 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SOX11P35716 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SOX11P35716 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SOX11P35716 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX11P35716 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SOX11P35716 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 PMPCAP1-201ENST00000508114 1576 ntBASIC16.35■□□□□ 0.21
SOX11P35716 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
SOX11P35716 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SOX11P35716 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.35■□□□□ 0.21
SOX11P35716 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SOX11P35716 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX11P35716 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SOX11P35716 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.35■□□□□ 0.21
SOX11P35716 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SOX11P35716 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.35■□□□□ 0.21
SOX11P35716 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.35■□□□□ 0.21
SOX11P35716 RPL13AP23-201ENST00000480739 586 ntBASIC16.35■□□□□ 0.21
SOX11P35716 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX11P35716 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.35■□□□□ 0.21
SOX11P35716 AD001527.2-201ENST00000622994 785 ntBASIC16.35■□□□□ 0.21
SOX11P35716 AC117500.6-201ENST00000624871 588 ntBASIC16.35■□□□□ 0.21
SOX11P35716 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SOX11P35716 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.35■□□□□ 0.21
SOX11P35716 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX11P35716 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
SOX11P35716 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.35■□□□□ 0.21
SOX11P35716 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
SOX11P35716 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms