Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.94■□□□□ 0.62
COPB2P35606 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.94■□□□□ 0.62
COPB2P35606 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.94■□□□□ 0.62
COPB2P35606 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.94■□□□□ 0.62
COPB2P35606 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.94■□□□□ 0.62
COPB2P35606 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.94■□□□□ 0.62
COPB2P35606 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC18.94■□□□□ 0.62
COPB2P35606 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.94■□□□□ 0.62
COPB2P35606 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.94■□□□□ 0.62
COPB2P35606 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
COPB2P35606 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.94■□□□□ 0.62
COPB2P35606 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.94■□□□□ 0.62
COPB2P35606 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.94■□□□□ 0.62
COPB2P35606 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
COPB2P35606 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.94■□□□□ 0.62
COPB2P35606 CETN4P-206ENST00000642099 2168 ntBASIC18.93■□□□□ 0.62
COPB2P35606 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
COPB2P35606 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.93■□□□□ 0.62
COPB2P35606 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.93■□□□□ 0.62
COPB2P35606 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COPB2P35606 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.93■□□□□ 0.62
COPB2P35606 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.93■□□□□ 0.62
COPB2P35606 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
COPB2P35606 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
COPB2P35606 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.93■□□□□ 0.62
COPB2P35606 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.93■□□□□ 0.62
COPB2P35606 AC244107.1-201ENST00000442033 332 ntBASIC18.93■□□□□ 0.62
COPB2P35606 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
COPB2P35606 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 SERBP1P5-201ENST00000510079 1181 ntBASIC18.93■□□□□ 0.62
COPB2P35606 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.93■□□□□ 0.62
COPB2P35606 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.93■□□□□ 0.62
COPB2P35606 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.93■□□□□ 0.62
COPB2P35606 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.93■□□□□ 0.62
COPB2P35606 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.93■□□□□ 0.62
COPB2P35606 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
COPB2P35606 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
COPB2P35606 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
COPB2P35606 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
COPB2P35606 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
COPB2P35606 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.92■□□□□ 0.62
COPB2P35606 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
COPB2P35606 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
COPB2P35606 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.92■□□□□ 0.62
COPB2P35606 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 CROCCP2-202ENST00000412962 2773 ntBASIC18.92■□□□□ 0.62
COPB2P35606 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
COPB2P35606 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.92■□□□□ 0.62
COPB2P35606 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.92■□□□□ 0.62
COPB2P35606 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
COPB2P35606 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.92■□□□□ 0.62
COPB2P35606 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
COPB2P35606 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.92■□□□□ 0.62
COPB2P35606 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
COPB2P35606 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.92■□□□□ 0.62
COPB2P35606 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
COPB2P35606 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.91■□□□□ 0.62
COPB2P35606 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
COPB2P35606 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms