Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RPA3P35244 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RPA3P35244 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RPA3P35244 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.88■□□□□ 0.29
RPA3P35244 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RPA3P35244 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RPA3P35244 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RPA3P35244 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RPA3P35244 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.87■□□□□ 0.29
RPA3P35244 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.87■□□□□ 0.29
RPA3P35244 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
RPA3P35244 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.87■□□□□ 0.29
RPA3P35244 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RPA3P35244 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
RPA3P35244 AKR1C7P-201ENST00000305623 895 ntBASIC16.87■□□□□ 0.29
RPA3P35244 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.87■□□□□ 0.29
RPA3P35244 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.87■□□□□ 0.29
RPA3P35244 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.87■□□□□ 0.29
RPA3P35244 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.87■□□□□ 0.29
RPA3P35244 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.87■□□□□ 0.29
RPA3P35244 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.87■□□□□ 0.29
RPA3P35244 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.87■□□□□ 0.29
RPA3P35244 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.87■□□□□ 0.29
RPA3P35244 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.87■□□□□ 0.29
RPA3P35244 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.87■□□□□ 0.29
RPA3P35244 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RPA3P35244 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.87■□□□□ 0.29
RPA3P35244 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RPA3P35244 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.86■□□□□ 0.29
RPA3P35244 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.86■□□□□ 0.29
RPA3P35244 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.86■□□□□ 0.29
RPA3P35244 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
RPA3P35244 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
RPA3P35244 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RPA3P35244 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.86■□□□□ 0.29
RPA3P35244 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 AC004870.1-201ENST00000315132 882 ntBASIC16.86■□□□□ 0.29
RPA3P35244 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.86■□□□□ 0.29
RPA3P35244 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RPA3P35244 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 SPDYE21P-201ENST00000413323 827 ntBASIC16.86■□□□□ 0.29
RPA3P35244 SIGLEC30P-201ENST00000455569 941 ntBASIC16.86■□□□□ 0.29
RPA3P35244 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.86■□□□□ 0.29
RPA3P35244 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.86■□□□□ 0.29
RPA3P35244 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.86■□□□□ 0.29
RPA3P35244 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.86■□□□□ 0.29
RPA3P35244 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.86■□□□□ 0.29
RPA3P35244 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 AL355877.3-201ENST00000622820 899 ntBASIC16.86■□□□□ 0.29
RPA3P35244 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.86■□□□□ 0.29
RPA3P35244 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.86■□□□□ 0.29
RPA3P35244 AL021920.2-201ENST00000624828 1351 ntBASIC16.86■□□□□ 0.29
RPA3P35244 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.86■□□□□ 0.29
RPA3P35244 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RPA3P35244 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
RPA3P35244 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.85■□□□□ 0.29
RPA3P35244 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
RPA3P35244 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RPA3P35244 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RPA3P35244 AC079776.2-201ENST00000641154 1609 ntBASIC16.85■□□□□ 0.29
RPA3P35244 MST1L-201ENST00000442552 2185 ntBASIC16.85■□□□□ 0.29
RPA3P35244 AC126177.1-201ENST00000547829 2218 ntBASIC16.85■□□□□ 0.29
RPA3P35244 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.85■□□□□ 0.29
RPA3P35244 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RPA3P35244 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms