Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.75■□□□□ 0.27
LSP1P33241 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.75■□□□□ 0.27
LSP1P33241 KRT18P48-201ENST00000434763 852 ntBASIC16.75■□□□□ 0.27
LSP1P33241 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.75■□□□□ 0.27
LSP1P33241 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.75■□□□□ 0.27
LSP1P33241 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.75■□□□□ 0.27
LSP1P33241 AC113410.3-201ENST00000623366 203 ntBASIC16.75■□□□□ 0.27
LSP1P33241 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.75■□□□□ 0.27
LSP1P33241 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LSP1P33241 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.75■□□□□ 0.27
LSP1P33241 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.75■□□□□ 0.27
LSP1P33241 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LSP1P33241 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.74■□□□□ 0.27
LSP1P33241 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.74■□□□□ 0.27
LSP1P33241 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.74■□□□□ 0.27
LSP1P33241 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.74■□□□□ 0.27
LSP1P33241 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 AC139749.1-202ENST00000617529 3139 ntBASIC16.74■□□□□ 0.27
LSP1P33241 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.74■□□□□ 0.27
LSP1P33241 SNORA78-201ENST00000459373 127 ntBASIC16.74■□□□□ 0.27
LSP1P33241 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LSP1P33241 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.74■□□□□ 0.27
LSP1P33241 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.74■□□□□ 0.27
LSP1P33241 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.74■□□□□ 0.27
LSP1P33241 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.74■□□□□ 0.27
LSP1P33241 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.74■□□□□ 0.27
LSP1P33241 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.74■□□□□ 0.27
LSP1P33241 AC026471.5-201ENST00000615068 467 ntBASIC16.74■□□□□ 0.27
LSP1P33241 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LSP1P33241 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.74■□□□□ 0.27
LSP1P33241 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.74■□□□□ 0.27
LSP1P33241 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.74■□□□□ 0.27
LSP1P33241 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LSP1P33241 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.74■□□□□ 0.27
LSP1P33241 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.74■□□□□ 0.27
LSP1P33241 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LSP1P33241 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LSP1P33241 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.73■□□□□ 0.27
LSP1P33241 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LSP1P33241 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.73■□□□□ 0.27
LSP1P33241 MIR4497-201ENST00000583208 89 ntBASIC16.73■□□□□ 0.27
LSP1P33241 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LSP1P33241 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.73■□□□□ 0.27
LSP1P33241 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.73■□□□□ 0.27
LSP1P33241 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms