Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA3P32297 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CHRNA3P32297 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 PMS2P1-201ENST00000431037 1228 ntBASIC17.59■□□□□ 0.41
CHRNA3P32297 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA3P32297 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.59■□□□□ 0.41
CHRNA3P32297 AC117500.6-201ENST00000624871 588 ntBASIC17.59■□□□□ 0.41
CHRNA3P32297 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA3P32297 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.59■□□□□ 0.41
CHRNA3P32297 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHRNA3P32297 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CHRNA3P32297 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 AC097637.2-201ENST00000624096 1997 ntBASIC17.59■□□□□ 0.41
CHRNA3P32297 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CHRNA3P32297 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA3P32297 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.58■□□□□ 0.41
CHRNA3P32297 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.58■□□□□ 0.41
CHRNA3P32297 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA3P32297 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA3P32297 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA3P32297 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA3P32297 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA3P32297 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA3P32297 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CHRNA3P32297 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.58■□□□□ 0.41
CHRNA3P32297 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.58■□□□□ 0.41
CHRNA3P32297 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CHRNA3P32297 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.58■□□□□ 0.41
CHRNA3P32297 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CHRNA3P32297 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA3P32297 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CHRNA3P32297 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA3P32297 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.58■□□□□ 0.4
CHRNA3P32297 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CHRNA3P32297 AC136632.2-201ENST00000512891 861 ntBASIC17.58■□□□□ 0.4
CHRNA3P32297 KRT18P58-201ENST00000527480 1120 ntBASIC17.58■□□□□ 0.4
CHRNA3P32297 UNC93B6-202ENST00000528242 690 ntBASIC17.58■□□□□ 0.4
CHRNA3P32297 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.58■□□□□ 0.4
CHRNA3P32297 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.58■□□□□ 0.4
CHRNA3P32297 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.58■□□□□ 0.4
CHRNA3P32297 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CHRNA3P32297 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.58■□□□□ 0.4
CHRNA3P32297 AC005593.1-201ENST00000624894 515 ntBASIC17.58■□□□□ 0.4
CHRNA3P32297 PGM5P2-202ENST00000637225 1043 ntBASIC17.58■□□□□ 0.4
CHRNA3P32297 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.58■□□□□ 0.4
CHRNA3P32297 AL139011.1-202ENST00000642063 584 ntBASIC17.58■□□□□ 0.4
CHRNA3P32297 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA3P32297 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA3P32297 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.58■□□□□ 0.4
CHRNA3P32297 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.58■□□□□ 0.4
CHRNA3P32297 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA3P32297 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CHRNA3P32297 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.57■□□□□ 0.4
CHRNA3P32297 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA3P32297 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHRNA3P32297 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA3P32297 KRT8P49-201ENST00000604166 1432 ntBASIC17.57■□□□□ 0.4
CHRNA3P32297 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA3P32297 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA3P32297 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA3P32297 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.57■□□□□ 0.4
CHRNA3P32297 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.57■□□□□ 0.4
CHRNA3P32297 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA3P32297 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 AL139424.1-201ENST00000607572 797 ntBASIC17.57■□□□□ 0.4
CHRNA3P32297 Z83851.2-201ENST00000609564 659 ntBASIC17.57■□□□□ 0.4
CHRNA3P32297 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA3P32297 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA3P32297 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHRNA3P32297 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA3P32297 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CHRNA3P32297 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA3P32297 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms