Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
TM4SF1P30408 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
TM4SF1P30408 MIR1908-201ENST00000410394 80 ntBASIC20.4■□□□□ 0.86
TM4SF1P30408 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
TM4SF1P30408 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.4■□□□□ 0.86
TM4SF1P30408 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.4■□□□□ 0.86
TM4SF1P30408 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
TM4SF1P30408 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.4■□□□□ 0.86
TM4SF1P30408 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.4■□□□□ 0.86
TM4SF1P30408 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TM4SF1P30408 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TM4SF1P30408 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC20.39■□□□□ 0.86
TM4SF1P30408 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.39■□□□□ 0.86
TM4SF1P30408 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TM4SF1P30408 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TM4SF1P30408 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
TM4SF1P30408 CLK3P2-201ENST00000427566 1453 ntBASIC20.39■□□□□ 0.85
TM4SF1P30408 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF1P30408 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
TM4SF1P30408 AC093525.8-201ENST00000624099 1342 ntBASIC20.39■□□□□ 0.85
TM4SF1P30408 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF1P30408 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.39■□□□□ 0.85
TM4SF1P30408 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF1P30408 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF1P30408 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TM4SF1P30408 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC20.39■□□□□ 0.85
TM4SF1P30408 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF1P30408 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.39■□□□□ 0.85
TM4SF1P30408 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.39■□□□□ 0.85
TM4SF1P30408 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF1P30408 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
TM4SF1P30408 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TM4SF1P30408 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.39■□□□□ 0.85
TM4SF1P30408 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.39■□□□□ 0.85
TM4SF1P30408 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.39■□□□□ 0.85
TM4SF1P30408 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TM4SF1P30408 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
TM4SF1P30408 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF1P30408 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.38■□□□□ 0.85
TM4SF1P30408 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF1P30408 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF1P30408 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.38■□□□□ 0.85
TM4SF1P30408 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TM4SF1P30408 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.38■□□□□ 0.85
TM4SF1P30408 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 FO393414.2-201ENST00000405153 598 ntBASIC20.38■□□□□ 0.85
TM4SF1P30408 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TM4SF1P30408 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.38■□□□□ 0.85
TM4SF1P30408 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TM4SF1P30408 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC20.38■□□□□ 0.85
TM4SF1P30408 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
TM4SF1P30408 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
TM4SF1P30408 AL391069.4-201ENST00000609583 481 ntBASIC20.38■□□□□ 0.85
TM4SF1P30408 MIR6869-201ENST00000619434 62 ntBASIC20.38■□□□□ 0.85
TM4SF1P30408 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
TM4SF1P30408 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.38■□□□□ 0.85
TM4SF1P30408 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TM4SF1P30408 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.38■□□□□ 0.85
TM4SF1P30408 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
TM4SF1P30408 AL133338.1-201ENST00000565695 1517 ntBASIC20.37■□□□□ 0.85
TM4SF1P30408 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.37■□□□□ 0.85
TM4SF1P30408 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.37■□□□□ 0.85
TM4SF1P30408 NOC2LP2-201ENST00000407594 1944 ntBASIC20.37■□□□□ 0.85
TM4SF1P30408 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC20.37■□□□□ 0.85
TM4SF1P30408 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
TM4SF1P30408 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TM4SF1P30408 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TM4SF1P30408 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC20.37■□□□□ 0.85
TM4SF1P30408 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
TM4SF1P30408 TIMM17BP1-201ENST00000545713 516 ntBASIC20.37■□□□□ 0.85
TM4SF1P30408 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.37■□□□□ 0.85
TM4SF1P30408 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.37■□□□□ 0.85
TM4SF1P30408 MIR6787-201ENST00000616675 61 ntBASIC20.37■□□□□ 0.85
TM4SF1P30408 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
TM4SF1P30408 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
TM4SF1P30408 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms