Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
COL8A2P25067 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
COL8A2P25067 AL139384.1-201ENST00000612143 3047 ntBASIC14.05□□□□□ -0.16
COL8A2P25067 AC016027.1-202ENST00000607927 1699 ntBASIC14.05□□□□□ -0.16
COL8A2P25067 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
COL8A2P25067 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
COL8A2P25067 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
COL8A2P25067 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.05□□□□□ -0.16
COL8A2P25067 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.05□□□□□ -0.16
COL8A2P25067 KRT18P32-201ENST00000424695 1287 ntBASIC14.05□□□□□ -0.16
COL8A2P25067 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 CYMP-203ENST00000474680 1263 ntBASIC14.05□□□□□ -0.16
COL8A2P25067 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
COL8A2P25067 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.05□□□□□ -0.16
COL8A2P25067 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.05□□□□□ -0.16
COL8A2P25067 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 AC009093.7-201ENST00000623853 1223 ntBASIC14.05□□□□□ -0.16
COL8A2P25067 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
COL8A2P25067 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.05□□□□□ -0.16
COL8A2P25067 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.05□□□□□ -0.16
COL8A2P25067 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL8A2P25067 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.05□□□□□ -0.16
COL8A2P25067 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
COL8A2P25067 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
COL8A2P25067 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
COL8A2P25067 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.04□□□□□ -0.16
COL8A2P25067 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.04□□□□□ -0.16
COL8A2P25067 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
COL8A2P25067 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 AC060834.1-201ENST00000443027 2032 ntBASIC14.04□□□□□ -0.16
COL8A2P25067 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.04□□□□□ -0.16
COL8A2P25067 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.04□□□□□ -0.16
COL8A2P25067 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.04□□□□□ -0.16
COL8A2P25067 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.04□□□□□ -0.16
COL8A2P25067 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.04□□□□□ -0.16
COL8A2P25067 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.04□□□□□ -0.16
COL8A2P25067 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
COL8A2P25067 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.04□□□□□ -0.16
COL8A2P25067 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
COL8A2P25067 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.04□□□□□ -0.16
COL8A2P25067 AL138918.1-201ENST00000568306 659 ntBASIC14.04□□□□□ -0.16
COL8A2P25067 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 AC027307.2-201ENST00000591252 911 ntBASIC14.04□□□□□ -0.16
COL8A2P25067 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.04□□□□□ -0.16
COL8A2P25067 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
COL8A2P25067 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms