Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CHMP24386 AC092850.2-201ENST00000623821 2697 ntBASIC15.62■□□□□ 0.09
CHMP24386 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CHMP24386 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.62■□□□□ 0.09
CHMP24386 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.62■□□□□ 0.09
CHMP24386 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CHMP24386 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CHMP24386 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.62■□□□□ 0.09
CHMP24386 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.62■□□□□ 0.09
CHMP24386 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.62■□□□□ 0.09
CHMP24386 AP000347.1-202ENST00000435868 847 ntBASIC15.62■□□□□ 0.09
CHMP24386 RPL13AP23-201ENST00000480739 586 ntBASIC15.62■□□□□ 0.09
CHMP24386 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.62■□□□□ 0.09
CHMP24386 AC145285.3-201ENST00000564603 959 ntBASIC15.62■□□□□ 0.09
CHMP24386 AC106730.1-201ENST00000566722 1090 ntBASIC15.62■□□□□ 0.09
CHMP24386 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.62■□□□□ 0.09
CHMP24386 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.62■□□□□ 0.09
CHMP24386 AC117500.6-201ENST00000624871 588 ntBASIC15.62■□□□□ 0.09
CHMP24386 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.62■□□□□ 0.09
CHMP24386 AF228730.7-201ENST00000641842 219 ntBASIC15.62■□□□□ 0.09
CHMP24386 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CHMP24386 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CHMP24386 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CHMP24386 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CHMP24386 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CHMP24386 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CHMP24386 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP24386 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
CHMP24386 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.61■□□□□ 0.09
CHMP24386 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CHMP24386 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP24386 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
CHMP24386 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
CHMP24386 ALOX12P2-203ENST00000570921 1945 ntBASIC15.61■□□□□ 0.09
CHMP24386 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.61■□□□□ 0.09
CHMP24386 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.61■□□□□ 0.09
CHMP24386 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.61■□□□□ 0.09
CHMP24386 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP24386 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP24386 AP002490.2-201ENST00000524791 560 ntBASIC15.61■□□□□ 0.09
CHMP24386 KRT18P58-201ENST00000527480 1120 ntBASIC15.61■□□□□ 0.09
CHMP24386 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CHMP24386 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.61■□□□□ 0.09
CHMP24386 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP24386 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CHMP24386 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CHMP24386 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CHMP24386 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.61■□□□□ 0.09
CHMP24386 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CHMP24386 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.6■□□□□ 0.09
CHMP24386 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CHMP24386 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.6■□□□□ 0.09
CHMP24386 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.6■□□□□ 0.09
CHMP24386 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CHMP24386 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CHMP24386 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms