Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL1P22362 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CCL1P22362 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CCL1P22362 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 FAM197Y8-203ENST00000450145 560 ntBASIC14.31□□□□□ -0.12
CCL1P22362 AC108073.2-201ENST00000464002 357 ntBASIC14.31□□□□□ -0.12
CCL1P22362 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CCL1P22362 AC012640.2-201ENST00000561606 901 ntBASIC14.31□□□□□ -0.12
CCL1P22362 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL1P22362 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CCL1P22362 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.31□□□□□ -0.12
CCL1P22362 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
CCL1P22362 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCL1P22362 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.31□□□□□ -0.12
CCL1P22362 AL592424.1-201ENST00000563624 1536 ntBASIC14.31□□□□□ -0.12
CCL1P22362 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCL1P22362 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL1P22362 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCL1P22362 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL1P22362 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CCL1P22362 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCL1P22362 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 RPS2P28-201ENST00000314255 741 ntBASIC14.3□□□□□ -0.12
CCL1P22362 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 MIR648-201ENST00000385046 94 ntBASIC14.3□□□□□ -0.12
CCL1P22362 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.3□□□□□ -0.12
CCL1P22362 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL1P22362 AF186996.4-201ENST00000467186 377 ntBASIC14.3□□□□□ -0.12
CCL1P22362 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL1P22362 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL1P22362 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
CCL1P22362 AC021097.1-201ENST00000607902 574 ntBASIC14.3□□□□□ -0.12
CCL1P22362 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL1P22362 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
CCL1P22362 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.3□□□□□ -0.12
CCL1P22362 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.3□□□□□ -0.12
CCL1P22362 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.3□□□□□ -0.12
CCL1P22362 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCL1P22362 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL1P22362 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
CCL1P22362 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL1P22362 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CCL1P22362 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CCL1P22362 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL1P22362 RNU1-129P-201ENST00000384064 167 ntBASIC14.29□□□□□ -0.12
CCL1P22362 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
CCL1P22362 PRSS29P-201ENST00000440800 595 ntBASIC14.29□□□□□ -0.12
CCL1P22362 AL160237.2-201ENST00000556165 472 ntBASIC14.29□□□□□ -0.12
CCL1P22362 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL1P22362 U1.21-201ENST00000580816 167 ntBASIC14.29□□□□□ -0.12
CCL1P22362 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CCL1P22362 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL1P22362 AC004790.2-201ENST00000623588 572 ntBASIC14.29□□□□□ -0.12
CCL1P22362 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.29□□□□□ -0.12
CCL1P22362 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.29□□□□□ -0.12
CCL1P22362 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 AC008741.2-201ENST00000612792 3115 ntBASIC14.29□□□□□ -0.12
CCL1P22362 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.29□□□□□ -0.12
CCL1P22362 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.29□□□□□ -0.12
CCL1P22362 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCL1P22362 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms