Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AL353801.3-201ENST00000609898 542 ntBASIC14.65□□□□□ -0.06
RAB3BP20337 AD001527.2-201ENST00000622994 785 ntBASIC14.65□□□□□ -0.06
RAB3BP20337 AC073592.5-201ENST00000624854 528 ntBASIC14.65□□□□□ -0.06
RAB3BP20337 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB3BP20337 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAB3BP20337 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3BP20337 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3BP20337 AC099063.4-201ENST00000641099 1602 ntBASIC14.65□□□□□ -0.06
RAB3BP20337 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3BP20337 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3BP20337 TCAF2P1-201ENST00000291129 2421 ntBASIC14.65□□□□□ -0.06
RAB3BP20337 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3BP20337 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAB3BP20337 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3BP20337 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3BP20337 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3BP20337 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAB3BP20337 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3BP20337 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.65□□□□□ -0.06
RAB3BP20337 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.65□□□□□ -0.06
RAB3BP20337 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RAB3BP20337 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
RAB3BP20337 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3BP20337 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
RAB3BP20337 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3BP20337 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RAB3BP20337 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3BP20337 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RAB3BP20337 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RAB3BP20337 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RAB3BP20337 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RAB3BP20337 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 AP002414.1-201ENST00000391405 1147 ntBASIC14.64□□□□□ -0.07
RAB3BP20337 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB3BP20337 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB3BP20337 MIR4497-201ENST00000583208 89 ntBASIC14.64□□□□□ -0.07
RAB3BP20337 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 AC124864.1-201ENST00000623408 392 ntBASIC14.64□□□□□ -0.07
RAB3BP20337 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3BP20337 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3BP20337 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3BP20337 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RAB3BP20337 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.64□□□□□ -0.07
RAB3BP20337 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3BP20337 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
RAB3BP20337 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.64□□□□□ -0.07
RAB3BP20337 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RAB3BP20337 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RAB3BP20337 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3BP20337 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.64□□□□□ -0.07
RAB3BP20337 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAB3BP20337 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RAB3BP20337 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3BP20337 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RAB3BP20337 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3BP20337 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
RAB3BP20337 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RAB3BP20337 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RAB3BP20337 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.63□□□□□ -0.07
RAB3BP20337 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.63□□□□□ -0.07
RAB3BP20337 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.63□□□□□ -0.07
RAB3BP20337 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RAB3BP20337 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RAB3BP20337 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms