Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 AC020907.1-201ENST00000616460 1350 ntBASIC19.97■□□□□ 0.79
COL11A2P13942 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A2P13942 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.97■□□□□ 0.79
COL11A2P13942 MIR1247-201ENST00000408206 136 ntBASIC19.97■□□□□ 0.79
COL11A2P13942 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC19.97■□□□□ 0.79
COL11A2P13942 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL11A2P13942 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC19.97■□□□□ 0.79
COL11A2P13942 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.97■□□□□ 0.79
COL11A2P13942 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A2P13942 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.97■□□□□ 0.79
COL11A2P13942 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC19.97■□□□□ 0.79
COL11A2P13942 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A2P13942 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC19.97■□□□□ 0.79
COL11A2P13942 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A2P13942 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL11A2P13942 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL11A2P13942 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL11A2P13942 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A2P13942 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.97■□□□□ 0.79
COL11A2P13942 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A2P13942 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC19.97■□□□□ 0.79
COL11A2P13942 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.97■□□□□ 0.79
COL11A2P13942 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A2P13942 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL11A2P13942 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.97■□□□□ 0.79
COL11A2P13942 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC19.96■□□□□ 0.79
COL11A2P13942 RPL28-203ENST00000428193 573 ntTSL 2 BASIC19.96■□□□□ 0.79
COL11A2P13942 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.96■□□□□ 0.79
COL11A2P13942 FTH1P14-201ENST00000482930 551 ntBASIC19.96■□□□□ 0.79
COL11A2P13942 CD74-212ENST00000524315 584 ntTSL 5 BASIC19.96■□□□□ 0.79
COL11A2P13942 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
COL11A2P13942 RPL28-207ENST00000558815 616 ntTSL 2 BASIC19.96■□□□□ 0.79
COL11A2P13942 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.96■□□□□ 0.79
COL11A2P13942 RN7SL219P-201ENST00000582872 296 ntBASIC19.96■□□□□ 0.79
COL11A2P13942 CU634019.7-201ENST00000624153 1185 ntBASIC19.96■□□□□ 0.79
COL11A2P13942 FP236241.2-201ENST00000624906 1185 ntBASIC19.96■□□□□ 0.79
COL11A2P13942 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.96■□□□□ 0.79
COL11A2P13942 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.96■□□□□ 0.79
COL11A2P13942 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.96■□□□□ 0.79
COL11A2P13942 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COL11A2P13942 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.96■□□□□ 0.79
COL11A2P13942 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
COL11A2P13942 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.96■□□□□ 0.79
COL11A2P13942 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
COL11A2P13942 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC19.96■□□□□ 0.79
COL11A2P13942 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COL11A2P13942 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC19.96■□□□□ 0.79
COL11A2P13942 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.96■□□□□ 0.79
COL11A2P13942 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.96■□□□□ 0.79
COL11A2P13942 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.96■□□□□ 0.79
COL11A2P13942 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.96■□□□□ 0.79
COL11A2P13942 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A2P13942 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL11A2P13942 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.95■□□□□ 0.78
COL11A2P13942 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A2P13942 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A2P13942 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.95■□□□□ 0.78
COL11A2P13942 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
COL11A2P13942 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A2P13942 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.95■□□□□ 0.78
COL11A2P13942 INTS4P2-202ENST00000614726 2019 ntBASIC19.95■□□□□ 0.78
COL11A2P13942 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COL11A2P13942 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC19.95■□□□□ 0.78
COL11A2P13942 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.95■□□□□ 0.78
COL11A2P13942 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC19.95■□□□□ 0.78
COL11A2P13942 APOC3-202ENST00000375345 604 ntTSL 5 BASIC19.95■□□□□ 0.78
COL11A2P13942 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
COL11A2P13942 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL11A2P13942 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
COL11A2P13942 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
COL11A2P13942 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
COL11A2P13942 AMT-206ENST00000458307 1860 ntTSL 2 BASIC19.94■□□□□ 0.78
COL11A2P13942 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.94■□□□□ 0.78
COL11A2P13942 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.94■□□□□ 0.78
COL11A2P13942 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.94■□□□□ 0.78
COL11A2P13942 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.94■□□□□ 0.78
COL11A2P13942 AC243960.2-201ENST00000600996 747 ntBASIC19.94■□□□□ 0.78
COL11A2P13942 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
COL11A2P13942 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
COL11A2P13942 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.94■□□□□ 0.78
COL11A2P13942 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
COL11A2P13942 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.94■□□□□ 0.78
COL11A2P13942 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms