Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-DOBP13765 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DOBP13765 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
HLA-DOBP13765 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 AC018695.7-201ENST00000624587 2492 ntBASIC14.93□□□□□ -0.02
HLA-DOBP13765 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.93□□□□□ -0.02
HLA-DOBP13765 AL590627.1-203ENST00000421194 1026 ntBASIC14.93□□□□□ -0.02
HLA-DOBP13765 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.93□□□□□ -0.02
HLA-DOBP13765 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 AP001350.2-201ENST00000625104 1094 ntBASIC14.93□□□□□ -0.02
HLA-DOBP13765 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DOBP13765 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DOBP13765 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.92□□□□□ -0.02
HLA-DOBP13765 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 AL513480.1-201ENST00000451731 511 ntBASIC14.92□□□□□ -0.02
HLA-DOBP13765 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 SLC25A1P1-201ENST00000528351 927 ntBASIC14.92□□□□□ -0.02
HLA-DOBP13765 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 AC145285.3-201ENST00000564603 959 ntBASIC14.92□□□□□ -0.02
HLA-DOBP13765 MIR4515-201ENST00000584082 81 ntBASIC14.92□□□□□ -0.02
HLA-DOBP13765 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 AC010507.1-201ENST00000633895 436 ntBASIC14.92□□□□□ -0.02
HLA-DOBP13765 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 GGT3P-204ENST00000453783 1664 ntBASIC14.92□□□□□ -0.02
HLA-DOBP13765 ME2P1-201ENST00000426028 1970 ntBASIC14.92□□□□□ -0.02
HLA-DOBP13765 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DOBP13765 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DOBP13765 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms