Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
COX4I1P13073 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.08■□□□□ 0.17
COX4I1P13073 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COX4I1P13073 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.08■□□□□ 0.16
COX4I1P13073 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.08■□□□□ 0.16
COX4I1P13073 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
COX4I1P13073 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.08■□□□□ 0.16
COX4I1P13073 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.08■□□□□ 0.16
COX4I1P13073 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.08■□□□□ 0.16
COX4I1P13073 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.08■□□□□ 0.16
COX4I1P13073 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
COX4I1P13073 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.08■□□□□ 0.16
COX4I1P13073 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
COX4I1P13073 AC004817.3-201ENST00000602957 2129 ntBASIC16.08■□□□□ 0.16
COX4I1P13073 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 AP002414.2-201ENST00000591780 3365 ntBASIC16.08■□□□□ 0.16
COX4I1P13073 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.08■□□□□ 0.16
COX4I1P13073 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.08■□□□□ 0.16
COX4I1P13073 PMPCAP1-201ENST00000508114 1576 ntBASIC16.08■□□□□ 0.16
COX4I1P13073 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.08■□□□□ 0.16
COX4I1P13073 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
COX4I1P13073 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.07■□□□□ 0.16
COX4I1P13073 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
COX4I1P13073 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.07■□□□□ 0.16
COX4I1P13073 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX4I1P13073 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COX4I1P13073 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX4I1P13073 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX4I1P13073 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
COX4I1P13073 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.07■□□□□ 0.16
COX4I1P13073 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COX4I1P13073 AL020989.1-201ENST00000422979 469 ntBASIC16.07■□□□□ 0.16
COX4I1P13073 TSPY5P-201ENST00000426936 936 ntBASIC16.07■□□□□ 0.16
COX4I1P13073 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.07■□□□□ 0.16
COX4I1P13073 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.07■□□□□ 0.16
COX4I1P13073 AC090616.6-201ENST00000582640 721 ntBASIC16.07■□□□□ 0.16
COX4I1P13073 TERC-201ENST00000602385 541 ntBASIC16.07■□□□□ 0.16
COX4I1P13073 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX4I1P13073 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.07■□□□□ 0.16
COX4I1P13073 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.07■□□□□ 0.16
COX4I1P13073 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
COX4I1P13073 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX4I1P13073 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
COX4I1P13073 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COX4I1P13073 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
COX4I1P13073 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.07■□□□□ 0.16
COX4I1P13073 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
COX4I1P13073 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COX4I1P13073 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
COX4I1P13073 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COX4I1P13073 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COX4I1P13073 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.06■□□□□ 0.16
COX4I1P13073 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.06■□□□□ 0.16
COX4I1P13073 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.06■□□□□ 0.16
COX4I1P13073 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.06■□□□□ 0.16
COX4I1P13073 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
COX4I1P13073 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.06■□□□□ 0.16
COX4I1P13073 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.06■□□□□ 0.16
COX4I1P13073 LINC00982-205ENST00000420957 435 ntBASIC16.06■□□□□ 0.16
COX4I1P13073 AC246785.2-201ENST00000432512 513 ntBASIC16.06■□□□□ 0.16
COX4I1P13073 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.06■□□□□ 0.16
COX4I1P13073 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.06■□□□□ 0.16
COX4I1P13073 NORAD-201ENST00000565493 5339 ntBASIC16.06■□□□□ 0.16
COX4I1P13073 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COX4I1P13073 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COX4I1P13073 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.06■□□□□ 0.16
COX4I1P13073 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
COX4I1P13073 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COX4I1P13073 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms