Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.76■□□□□ 0.27
THRAP10827 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
THRAP10827 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
THRAP10827 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.76■□□□□ 0.27
THRAP10827 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
THRAP10827 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.76■□□□□ 0.27
THRAP10827 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
THRAP10827 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.76■□□□□ 0.27
THRAP10827 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.76■□□□□ 0.27
THRAP10827 MIR3687-2-201ENST00000577708 61 ntBASIC16.76■□□□□ 0.27
THRAP10827 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.76■□□□□ 0.27
THRAP10827 MIR3687-1-201ENST00000614492 61 ntBASIC16.76■□□□□ 0.27
THRAP10827 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.76■□□□□ 0.27
THRAP10827 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
THRAP10827 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
THRAP10827 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.76■□□□□ 0.27
THRAP10827 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 AC009336.1-201ENST00000608941 1553 ntBASIC16.76■□□□□ 0.27
THRAP10827 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.76■□□□□ 0.27
THRAP10827 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
THRAP10827 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
THRAP10827 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.75■□□□□ 0.27
THRAP10827 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
THRAP10827 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 AC023274.1-201ENST00000418278 595 ntBASIC16.75■□□□□ 0.27
THRAP10827 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
THRAP10827 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.75■□□□□ 0.27
THRAP10827 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.75■□□□□ 0.27
THRAP10827 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
THRAP10827 AC108073.2-201ENST00000464002 357 ntBASIC16.75■□□□□ 0.27
THRAP10827 RPS15P9-201ENST00000494093 319 ntBASIC16.75■□□□□ 0.27
THRAP10827 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.75■□□□□ 0.27
THRAP10827 IGHV3-65-201ENST00000523210 341 ntBASIC16.75■□□□□ 0.27
THRAP10827 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.75■□□□□ 0.27
THRAP10827 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.75■□□□□ 0.27
THRAP10827 AC008667.4-201ENST00000607370 168 ntBASIC16.75■□□□□ 0.27
THRAP10827 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.75■□□□□ 0.27
THRAP10827 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
THRAP10827 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
THRAP10827 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
THRAP10827 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
THRAP10827 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
THRAP10827 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
THRAP10827 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
THRAP10827 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
THRAP10827 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 AC068418.2-201ENST00000577309 3703 ntBASIC16.74■□□□□ 0.27
THRAP10827 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
THRAP10827 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.74■□□□□ 0.27
THRAP10827 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
THRAP10827 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.74■□□□□ 0.27
THRAP10827 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.74■□□□□ 0.27
THRAP10827 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
THRAP10827 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
THRAP10827 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
THRAP10827 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.74■□□□□ 0.27
THRAP10827 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.74■□□□□ 0.27
THRAP10827 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.74■□□□□ 0.27
THRAP10827 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
THRAP10827 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.74■□□□□ 0.27
THRAP10827 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms