Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
UBCP0CG48 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UBCP0CG48 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.66□□□□□ -0.06
UBCP0CG48 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.66□□□□□ -0.06
UBCP0CG48 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UBCP0CG48 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
UBCP0CG48 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UBCP0CG48 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
UBCP0CG48 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.66□□□□□ -0.06
UBCP0CG48 GGT3P-204ENST00000453783 1664 ntBASIC14.66□□□□□ -0.06
UBCP0CG48 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
UBCP0CG48 ATP5G2P1-201ENST00000433580 426 ntBASIC14.66□□□□□ -0.06
UBCP0CG48 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.66□□□□□ -0.06
UBCP0CG48 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.66□□□□□ -0.06
UBCP0CG48 BX005266.1-201ENST00000473402 457 ntBASIC14.66□□□□□ -0.06
UBCP0CG48 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.66□□□□□ -0.06
UBCP0CG48 AP001269.4-201ENST00000609611 512 ntBASIC14.66□□□□□ -0.06
UBCP0CG48 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
UBCP0CG48 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UBCP0CG48 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
UBCP0CG48 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.66□□□□□ -0.06
UBCP0CG48 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.66□□□□□ -0.06
UBCP0CG48 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.66□□□□□ -0.06
UBCP0CG48 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
UBCP0CG48 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBCP0CG48 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
UBCP0CG48 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.65□□□□□ -0.06
UBCP0CG48 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
UBCP0CG48 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
UBCP0CG48 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 RBM17P3-201ENST00000417687 1192 ntBASIC14.65□□□□□ -0.06
UBCP0CG48 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.65□□□□□ -0.06
UBCP0CG48 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.65□□□□□ -0.06
UBCP0CG48 AC106795.1-205ENST00000512851 1056 ntBASIC14.65□□□□□ -0.06
UBCP0CG48 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 AC138894.3-201ENST00000603787 634 ntBASIC14.65□□□□□ -0.06
UBCP0CG48 AL139424.1-201ENST00000607572 797 ntBASIC14.65□□□□□ -0.06
UBCP0CG48 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 AL589182.2-201ENST00000619332 1049 ntBASIC14.65□□□□□ -0.06
UBCP0CG48 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
UBCP0CG48 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
UBCP0CG48 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
UBCP0CG48 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
UBCP0CG48 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBCP0CG48 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.64□□□□□ -0.07
UBCP0CG48 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBCP0CG48 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
UBCP0CG48 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms