Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.33■□□□□ 0.04
THBS1P07996 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.33■□□□□ 0.04
THBS1P07996 FAM185BP-201ENST00000443595 716 ntBASIC15.33■□□□□ 0.04
THBS1P07996 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
THBS1P07996 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.33■□□□□ 0.04
THBS1P07996 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.33■□□□□ 0.04
THBS1P07996 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.33■□□□□ 0.04
THBS1P07996 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.33■□□□□ 0.04
THBS1P07996 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.33■□□□□ 0.04
THBS1P07996 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.33■□□□□ 0.04
THBS1P07996 AC004790.2-201ENST00000623588 572 ntBASIC15.33■□□□□ 0.04
THBS1P07996 AC148477.8-201ENST00000624298 468 ntBASIC15.33■□□□□ 0.04
THBS1P07996 AC117500.6-201ENST00000624871 588 ntBASIC15.33■□□□□ 0.04
THBS1P07996 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
THBS1P07996 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.33■□□□□ 0.04
THBS1P07996 IL9RP2-201ENST00000423948 1312 ntBASIC15.33■□□□□ 0.04
THBS1P07996 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
THBS1P07996 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.33■□□□□ 0.04
THBS1P07996 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THBS1P07996 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THBS1P07996 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
THBS1P07996 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.33■□□□□ 0.04
THBS1P07996 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
THBS1P07996 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
THBS1P07996 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
THBS1P07996 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.33■□□□□ 0.04
THBS1P07996 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
THBS1P07996 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
THBS1P07996 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THBS1P07996 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
THBS1P07996 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS1P07996 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
THBS1P07996 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
THBS1P07996 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THBS1P07996 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.32■□□□□ 0.04
THBS1P07996 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS1P07996 AL031284.1-201ENST00000419297 478 ntBASIC15.32■□□□□ 0.04
THBS1P07996 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.32■□□□□ 0.04
THBS1P07996 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.32■□□□□ 0.04
THBS1P07996 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.32■□□□□ 0.04
THBS1P07996 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS1P07996 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
THBS1P07996 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
THBS1P07996 MIR4515-201ENST00000584082 81 ntBASIC15.32■□□□□ 0.04
THBS1P07996 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
THBS1P07996 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THBS1P07996 ACTL9-202ENST00000612068 1252 ntBASIC15.32■□□□□ 0.04
THBS1P07996 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.32■□□□□ 0.04
THBS1P07996 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THBS1P07996 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
THBS1P07996 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.32■□□□□ 0.04
THBS1P07996 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
THBS1P07996 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
THBS1P07996 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.31■□□□□ 0.04
THBS1P07996 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
THBS1P07996 PCDH8P1-201ENST00000428983 2773 ntBASIC15.31■□□□□ 0.04
THBS1P07996 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.31■□□□□ 0.04
THBS1P07996 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.31■□□□□ 0.04
THBS1P07996 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
THBS1P07996 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.31■□□□□ 0.04
THBS1P07996 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms